Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00451
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    40   2e-05
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    39   5e-05
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    36   3e-04
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   0.93 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.7  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.7  

>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 39.9 bits (89), Expect = 2e-05
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +3

Query: 714 INEPTAAAIAYGLDKKEER 770
           INEPTAAAIAYGLDKK ER
Sbjct: 1   INEPTAAAIAYGLDKKAER 19



 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 767 EKNVLVLDLGG 799
           E+NVL+ DLGG
Sbjct: 20  ERNVLIFDLGG 30


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 38.7 bits (86), Expect = 5e-05
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 714 INEPTAAAIAYGLDKKEER 770
           INEPTAAAIAYGLDKK E+
Sbjct: 1   INEPTAAAIAYGLDKKAEK 19



 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 767 EKNVLVLDLGG 799
           E+NVL+ DLGG
Sbjct: 20  ERNVLIFDLGG 30


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 36.3 bits (80), Expect = 3e-04
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 714 INEPTAAAIAYGLDKK 761
           INEPTAAAIAYGLDKK
Sbjct: 1   INEPTAAAIAYGLDKK 16



 Score = 25.0 bits (52), Expect = 0.70
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 755 QEGGEKNVLVLDLGG 799
           ++G E+N+LV DLGG
Sbjct: 15  KKGAEQNILVYDLGG 29


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 797 HPNQGLEHSSLLLLVKAIGDSCSSRLINDSHYIKTRNCTSIFGCLT 660
           +P Q L    +LLLV +   + S R I D  + K    T I   ++
Sbjct: 348 YPKQPLRFGKILLLVSSTFRTISGRTIEDLFFKKVIRDTPIVAIIS 393


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 669 TKDAGTISGLNVMRIINEPTAA 734
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 200 PYLSPSCRRHK-RPRPPKLARTNSTAS*PCKIYRLKDSEINKN 75
           PY S     H  + RPP+ +  +++ +  CK+Y   + + N N
Sbjct: 47  PYASSQHHHHHLQARPPQDSPYDASVAAACKLYS-SEGQQNSN 88


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 116 CKIYRLKDSEINKNLNKIIF 57
           C   +LK  EI  ++NK+IF
Sbjct: 288 CDKVQLKIGEIKYSVNKLIF 307


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 495 AVLFNDLEGEELNIMLYSLVTPFTTNQTLGIK 400
           AVL ++L+ E++ + L S+    T    LG++
Sbjct: 16  AVLIDELKNEDVQLRLNSIKKLSTIALALGVE 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,260
Number of Sequences: 336
Number of extensions: 3838
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)