Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00451
(800 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 143 3e-35
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 134 1e-32
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 131 1e-31
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 120 2e-28
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 120 2e-28
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 68 1e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 64 3e-11
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 52 1e-07
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.1
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 26 7.2
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 26 7.2
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 25 9.5
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 25 9.5
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 143 bits (346), Expect = 3e-35
Identities = 67/81 (82%), Positives = 75/81 (92%)
Frame = +3
Query: 531 KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMR 710
K F PEEISAM+L+KMK+TAEAYLGK VTHAVVTVPAYFNDAQRQATKDAGTI+GLNV+R
Sbjct: 143 KKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIR 202
Query: 711 IINEPTAAAIAYGLDKKEERR 773
I+NEPTAAAIAYGLDK + +
Sbjct: 203 IVNEPTAAAIAYGLDKTDTEK 223
Score = 124 bits (298), Expect = 2e-29
Identities = 56/84 (66%), Positives = 71/84 (84%)
Frame = +1
Query: 259 KNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSD 438
KNGRVEIIANDQGNRITPSYVAFT+D ERL+G+AAKNQ +NPENT+FD KRLIGR++ +
Sbjct: 53 KNGRVEIIANDQGNRITPSYVAFTED-ERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDE 111
Query: 439 QTVQHDVKFFPFKVVEKNSKPHVQ 510
+T+ D+K FPF +V ++P V+
Sbjct: 112 KTMAKDIKSFPFHIVNDKNRPLVE 135
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2
Query: 206 GTVIGIDLGTTYSCVGATK 262
GTVIGIDLGTTYSCV K
Sbjct: 35 GTVIGIDLGTTYSCVAVMK 53
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 134 bits (325), Expect = 1e-32
Identities = 66/94 (70%), Positives = 76/94 (80%)
Frame = +3
Query: 486 KEQQTSCSVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQ 665
K+ + V+ K F PEEIS+MVL KM+ETAEAYLG KVT AVVTVPAYFND+QRQ
Sbjct: 95 KDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQ 154
Query: 666 ATKDAGTISGLNVMRIINEPTAAAIAYGLDKKEE 767
ATKDAG I+GLNV+RIINEPTAAAIAYGLD+ +
Sbjct: 155 ATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQ 188
Score = 127 bits (306), Expect = 2e-30
Identities = 61/93 (65%), Positives = 72/93 (77%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
+ N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP NT+FDAKRLIGR++
Sbjct: 19 FSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFD 77
Query: 436 DQTVQHDVKFFPFKVVEKNSKPHVQYKLHKATK 534
D VQ D+K +PFKV+ K+ KP +Q + TK
Sbjct: 78 DPEVQSDMKHWPFKVISKDGKPVLQVEYKGETK 110
Score = 32.3 bits (70), Expect = 0.083
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 215 IGIDLGTTYSCVG 253
IGIDLGTTYSCVG
Sbjct: 5 IGIDLGTTYSCVG 17
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 131 bits (317), Expect = 1e-31
Identities = 64/94 (68%), Positives = 76/94 (80%)
Frame = +3
Query: 486 KEQQTSCSVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQ 665
K+ + V+ K F PEEIS+MVL KM+E+AEA+LG KVT AVVTVPAYFND+QRQ
Sbjct: 95 KDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQ 154
Query: 666 ATKDAGTISGLNVMRIINEPTAAAIAYGLDKKEE 767
ATKDAG I+GLNV+RIINEPTAAAIAYGLD+ +
Sbjct: 155 ATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQ 188
Score = 130 bits (314), Expect = 2e-31
Identities = 62/93 (66%), Positives = 73/93 (78%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
+ N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP NT+FDAKRLIGR ++
Sbjct: 19 FSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFN 77
Query: 436 DQTVQHDVKFFPFKVVEKNSKPHVQYKLHKATK 534
D VQ D+K +PFKV+EK+ KP +Q + TK
Sbjct: 78 DPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETK 110
Score = 32.3 bits (70), Expect = 0.083
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 215 IGIDLGTTYSCVG 253
IGIDLGTTYSCVG
Sbjct: 5 IGIDLGTTYSCVG 17
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 120 bits (290), Expect = 2e-28
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = +3
Query: 531 KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMR 710
K ++P +I +L+KM+ETA YLGK V +AVVTVPAYFND+QRQATK AG I+GLNV+R
Sbjct: 156 KTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLR 215
Query: 711 IINEPTAAAIAYGLDKKEE 767
++NEPTAAA+AYGLDKK +
Sbjct: 216 VVNEPTAAALAYGLDKKND 234
Score = 91.9 bits (218), Expect = 1e-19
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +1
Query: 247 CRCYKNGRV-EIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIG 423
C G+ ++IAN +G R TPS VAFT+DGERL+G +AK Q NPENT F KRLIG
Sbjct: 63 CLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIG 122
Query: 424 REWSDQTVQHDVKFFPFKVVEKNS 495
R + + VQ D+K P+K+VE ++
Sbjct: 123 RRFKEPEVQRDIKEVPYKIVEHSN 146
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 206 GTVIGIDLGTTYSCV 250
G VIGIDLGTT SC+
Sbjct: 50 GPVIGIDLGTTTSCL 64
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 120 bits (290), Expect = 2e-28
Identities = 58/80 (72%), Positives = 68/80 (85%)
Frame = +3
Query: 531 KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMR 710
K F +EISAMVLTKMKE +EA L K+V AV+TVPAYF+D+QR ATKDAG I+GLNV+R
Sbjct: 114 KQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLR 173
Query: 711 IINEPTAAAIAYGLDKKEER 770
IINEPTAAAIAYGLD K ++
Sbjct: 174 IINEPTAAAIAYGLDAKSDK 193
Score = 108 bits (260), Expect = 8e-25
Identities = 50/85 (58%), Positives = 62/85 (72%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
++ VEII NDQG R TPS+VAFT+ ERL+GDAAKNQ NP NTVFDAKRLIGR +
Sbjct: 23 WETANVEIIPNDQGARTTPSFVAFTET-ERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYE 81
Query: 436 DQTVQHDVKFFPFKVVEKNSKPHVQ 510
D Q D+K +PFKV++ N P ++
Sbjct: 82 DPETQKDIKHWPFKVIDNNGIPTIE 106
Score = 29.9 bits (64), Expect = 0.44
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 215 IGIDLGTTYSCV 250
IGIDLGTTYSCV
Sbjct: 9 IGIDLGTTYSCV 20
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 68.1 bits (159), Expect = 1e-12
Identities = 33/85 (38%), Positives = 53/85 (62%)
Frame = +3
Query: 510 VQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTI 689
VQ + F+ ++ A TK+K AEA L V+ V+++PA+F D QR+A +A I
Sbjct: 107 VQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANI 166
Query: 690 SGLNVMRIINEPTAAAIAYGLDKKE 764
+GLN +R++N+ AAA+ YG+ K +
Sbjct: 167 AGLNPLRLMNDNAAAALTYGITKTD 191
Score = 51.6 bits (118), Expect = 1e-07
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 226 FGYHLLMCRCYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFD 405
FG + +N +++I N+ NR TPS V++ + R +G+AAK+ +N NTV
Sbjct: 12 FGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERS-RFLGEAAKSAEASNFRNTVGS 70
Query: 406 AKRLIGREWSDQTVQH-DVKFFPFKVVE 486
KRL GR + D ++ + F K+ E
Sbjct: 71 LKRLAGRTYDDPEIKDIESNFISAKLTE 98
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 63.7 bits (148), Expect = 3e-11
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +3
Query: 528 DKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 707
+K+ E S L ++ E+AE +LG KV V++VP YF DAQR+A + A +GL V+
Sbjct: 135 EKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVL 194
Query: 708 RIINEPTAAAIA 743
++I++P A +A
Sbjct: 195 QLIHDPAAVILA 206
Score = 47.2 bits (107), Expect = 3e-06
Identities = 21/65 (32%), Positives = 41/65 (63%)
Frame = +1
Query: 259 KNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSD 438
++G+ +++AN++GNR PS +++ D E G A+ QL N +N+V + + L+G+ +
Sbjct: 42 RDGKTDVLANEEGNRQIPSILSYHGDQE-YHGVQARGQLVRNADNSVTNFRDLLGKSHDE 100
Query: 439 QTVQH 453
T+ H
Sbjct: 101 LTLHH 105
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 51.6 bits (118), Expect = 1e-07
Identities = 29/90 (32%), Positives = 47/90 (52%)
Frame = +3
Query: 489 EQQTSCSVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQA 668
E+ TS ++ ++ EEI AM + AE +K+T V+TVP +FN+ QR
Sbjct: 119 EETTSGISFVISDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSI 178
Query: 669 TKDAGTISGLNVMRIINEPTAAAIAYGLDK 758
+A I +V+ +I++ A AI Y L +
Sbjct: 179 LLEAARILNKHVLALIDDNVAVAIEYSLSR 208
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 680 SIFGCLTLSIIEISRHSNNSMSNLFSKVSLSSLLHFSQNHS 558
+I G + L+ I ++N +N+F L+ L HF + S
Sbjct: 2586 NILGRIALAFTSIDENANLESANIFEHARLALLQHFMDHSS 2626
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 550 SSGANTLSPCEVCTEHEVCCSFQR 479
S A T S CE C ++C S R
Sbjct: 20 SENAGTASACEGCPNQQICASAPR 43
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -3
Query: 549 LQEQILCRLVKFVLNMRFAVLF--NDLEGEELNIMLYSL 439
LQE L ++V+ V + ++ ND+EG E +I LY+L
Sbjct: 185 LQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDLYTL 223
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 337 GERLIGDAAKNQLTTNPENT 396
GE ++ D+ N TNP+NT
Sbjct: 6 GENIVSDSIVNMELTNPDNT 25
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 329 VKATYEGVMRFPWS 288
+K TYEG +R PWS
Sbjct: 284 MKLTYEGELRAPWS 297
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,080,294
Number of Sequences: 5004
Number of extensions: 60242
Number of successful extensions: 199
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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