Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00451
(800 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 145 3e-35
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 145 3e-35
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 145 3e-35
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 142 3e-34
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 134 6e-32
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 130 1e-30
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 130 1e-30
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 130 1e-30
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 129 2e-30
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 128 6e-30
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 124 5e-29
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 124 7e-29
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 110 9e-25
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 107 6e-24
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 72 4e-13
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 70 2e-12
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 70 2e-12
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 66 3e-11
At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 65 6e-11
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 54 1e-07
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 54 1e-07
At5g37470.1 68418.m04509 hypothetical protein contains Pfam PF04... 30 1.6
At4g32030.2 68417.m04559 expressed protein 30 1.6
At4g32030.1 68417.m04560 expressed protein 30 1.6
At1g69150.1 68414.m07911 DC1 domain-containing protein contains ... 30 2.1
At5g37620.1 68418.m04531 DC1 domain-containing protein contains ... 29 3.6
At5g37460.1 68418.m04508 hypothetical protein contains Pfam PF04... 28 6.3
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 145 bits (352), Expect = 3e-35
Identities = 74/101 (73%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Frame = +3
Query: 462 VLPLQGR*KEQQTSCSVQTSQGD-KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 638
++P Q K+ + V+ G+ KVF+PEEISAM+LTKMKETAEAYLGKK+ AVVTVP
Sbjct: 120 LVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVP 179
Query: 639 AYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDKK 761
AYFNDAQRQATKDAG I+GLNV RIINEPTAAAIAYGLDKK
Sbjct: 180 AYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKK 220
Score = 126 bits (303), Expect = 2e-29
Identities = 58/88 (65%), Positives = 70/88 (79%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
YKNG VEIIANDQGNRITPS+V FT D ERLIG+AAKNQ NPE TVFD KRLIGR++
Sbjct: 52 YKNGHVEIIANDQGNRITPSWVGFT-DSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFE 110
Query: 436 DQTVQHDVKFFPFKVVEKNSKPHVQYKL 519
D+ VQ D K P+++V K+ KP++Q K+
Sbjct: 111 DKEVQKDRKLVPYQIVNKDGKPYIQVKI 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 203 IGTVIGIDLGTTYSCVGATK 262
+G+VIGIDLGTTYSCVG K
Sbjct: 34 LGSVIGIDLGTTYSCVGVYK 53
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 755 QEGGEKNVLVLDLGG 799
++GGEKN+LV DLGG
Sbjct: 219 KKGGEKNILVFDLGG 233
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 145 bits (352), Expect = 3e-35
Identities = 74/101 (73%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Frame = +3
Query: 462 VLPLQGR*KEQQTSCSVQTSQGD-KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 638
++P Q K+ + V+ G+ KVF+PEEISAM+LTKMKETAEAYLGKK+ AVVTVP
Sbjct: 120 LVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVP 179
Query: 639 AYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDKK 761
AYFNDAQRQATKDAG I+GLNV RIINEPTAAAIAYGLDKK
Sbjct: 180 AYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKK 220
Score = 126 bits (303), Expect = 2e-29
Identities = 58/88 (65%), Positives = 70/88 (79%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
YKNG VEIIANDQGNRITPS+V FT D ERLIG+AAKNQ NPE TVFD KRLIGR++
Sbjct: 52 YKNGHVEIIANDQGNRITPSWVGFT-DSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFE 110
Query: 436 DQTVQHDVKFFPFKVVEKNSKPHVQYKL 519
D+ VQ D K P+++V K+ KP++Q K+
Sbjct: 111 DKEVQKDRKLVPYQIVNKDGKPYIQVKI 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 203 IGTVIGIDLGTTYSCVGATK 262
+G+VIGIDLGTTYSCVG K
Sbjct: 34 LGSVIGIDLGTTYSCVGVYK 53
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 755 QEGGEKNVLVLDLGG 799
++GGEKN+LV DLGG
Sbjct: 219 KKGGEKNILVFDLGG 233
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 145 bits (352), Expect = 3e-35
Identities = 74/101 (73%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Frame = +3
Query: 462 VLPLQGR*KEQQTSCSVQTSQGD-KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 638
++P Q K+ + V+ G+ KVF+PEEISAM+LTKMKETAEAYLGKK+ AVVTVP
Sbjct: 120 LVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVP 179
Query: 639 AYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDKK 761
AYFNDAQRQATKDAG I+GLNV RIINEPTAAAIAYGLDKK
Sbjct: 180 AYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKK 220
Score = 126 bits (303), Expect = 2e-29
Identities = 58/88 (65%), Positives = 70/88 (79%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
YKNG VEIIANDQGNRITPS+V FT D ERLIG+AAKNQ NPE TVFD KRLIGR++
Sbjct: 52 YKNGHVEIIANDQGNRITPSWVGFT-DSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFE 110
Query: 436 DQTVQHDVKFFPFKVVEKNSKPHVQYKL 519
D+ VQ D K P+++V K+ KP++Q K+
Sbjct: 111 DKEVQKDRKLVPYQIVNKDGKPYIQVKI 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 203 IGTVIGIDLGTTYSCVGATK 262
+G+VIGIDLGTTYSCVG K
Sbjct: 34 LGSVIGIDLGTTYSCVGVYK 53
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 755 QEGGEKNVLVLDLGG 799
++GGEKN+LV DLGG
Sbjct: 219 KKGGEKNILVFDLGG 233
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 142 bits (343), Expect = 3e-34
Identities = 69/99 (69%), Positives = 82/99 (82%)
Frame = +3
Query: 465 LPLQGR*KEQQTSCSVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 644
LP + K+ + V+ +K+F+PEEISAM+LTKMKETAEA+LGKK+ AV+TVPAY
Sbjct: 136 LPYKVVNKDGKPYIQVKVKGEEKLFSPEEISAMILTKMKETAEAFLGKKIKDAVITVPAY 195
Query: 645 FNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDKK 761
FNDAQRQATKDAG I+GLNV+RIINEPT AAIAYGLDKK
Sbjct: 196 FNDAQRQATKDAGAIAGLNVVRIINEPTGAAIAYGLDKK 234
Score = 126 bits (304), Expect = 2e-29
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
Y N VEIIANDQGNRITPS+VAFT D ERLIG+AAKNQ NPE T+FD KRLIGR++
Sbjct: 67 YHNKHVEIIANDQGNRITPSWVAFT-DTERLIGEAAKNQAAKNPERTIFDPKRLIGRKFD 125
Query: 436 DQTVQHDVKFFPFKVVEKNSKPHVQYKL 519
D VQ D+KF P+KVV K+ KP++Q K+
Sbjct: 126 DPDVQRDIKFLPYKVVNKDGKPYIQVKV 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 203 IGTVIGIDLGTTYSCVG 253
+GTVIGIDLGTTYSCVG
Sbjct: 49 LGTVIGIDLGTTYSCVG 65
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 134 bits (324), Expect = 6e-32
Identities = 64/78 (82%), Positives = 72/78 (92%)
Frame = +3
Query: 528 DKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 707
+K F+PEEIS+MVL KMKE AEA+LG+ V +AVVTVPAYFND+QRQATKDAG ISGLNV+
Sbjct: 114 EKQFSPEEISSMVLVKMKEVAEAFLGRTVKNAVVTVPAYFNDSQRQATKDAGAISGLNVL 173
Query: 708 RIINEPTAAAIAYGLDKK 761
RIINEPTAAAIAYGLDKK
Sbjct: 174 RIINEPTAAAIAYGLDKK 191
Score = 116 bits (278), Expect = 2e-26
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
+ N RVEII NDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP+NTVFDAKRLIGR++S
Sbjct: 23 WMNDRVEIIPNDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFS 81
Query: 436 DQTVQHDVKFFPFKVVE-KNSKPHV 507
D +VQ D+ +PFKVV KP +
Sbjct: 82 DPSVQSDILHWPFKVVSGPGEKPMI 106
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 215 IGIDLGTTYSCVGATKMDV*KSLP 286
IGIDLGTTYSCVG D + +P
Sbjct: 9 IGIDLGTTYSCVGVWMNDRVEIIP 32
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 130 bits (314), Expect = 1e-30
Identities = 62/78 (79%), Positives = 70/78 (89%)
Frame = +3
Query: 528 DKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 707
DK F+ EEIS+M+L KM+E AEAYLG + +AVVTVPAYFND+QRQATKDAG I+GLNVM
Sbjct: 115 DKEFSAEEISSMILIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVM 174
Query: 708 RIINEPTAAAIAYGLDKK 761
RIINEPTAAAIAYGLDKK
Sbjct: 175 RIINEPTAAAIAYGLDKK 192
Score = 111 bits (268), Expect = 4e-25
Identities = 53/73 (72%), Positives = 62/73 (84%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP NTVFDAKRLIGR ++
Sbjct: 24 WQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFT 82
Query: 436 DQTVQHDVKFFPF 474
D +VQ D+K +PF
Sbjct: 83 DSSVQSDIKLWPF 95
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 206 GTVIGIDLGTTYSCVGATKMD 268
G IGIDLGTTYSCVG + D
Sbjct: 7 GPAIGIDLGTTYSCVGVWQHD 27
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 130 bits (313), Expect = 1e-30
Identities = 63/78 (80%), Positives = 70/78 (89%)
Frame = +3
Query: 528 DKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 707
+K FA EEIS+MVL KM+E AEAYLG + +AVVTVPAYFND+QRQATKDAG I+GLNVM
Sbjct: 115 EKEFAAEEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVM 174
Query: 708 RIINEPTAAAIAYGLDKK 761
RIINEPTAAAIAYGLDKK
Sbjct: 175 RIINEPTAAAIAYGLDKK 192
Score = 117 bits (281), Expect = 1e-26
Identities = 60/90 (66%), Positives = 71/90 (78%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP NTVFDAKRLIGR +S
Sbjct: 24 WQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFS 82
Query: 436 DQTVQHDVKFFPFKV-VEKNSKP--HVQYK 516
D +VQ D+K +PFK+ KP +V+YK
Sbjct: 83 DSSVQSDMKLWPFKIQAGPADKPMIYVEYK 112
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 206 GTVIGIDLGTTYSCVGATKMD 268
G IGIDLGTTYSCVG + D
Sbjct: 7 GPAIGIDLGTTYSCVGVWQHD 27
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 130 bits (313), Expect = 1e-30
Identities = 62/78 (79%), Positives = 70/78 (89%)
Frame = +3
Query: 528 DKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 707
+K FA EEIS+MVL KM+E AEAYLG + +AVVTVPAYFND+QRQATKDAG I+GLNV+
Sbjct: 115 EKQFAAEEISSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVL 174
Query: 708 RIINEPTAAAIAYGLDKK 761
RIINEPTAAAIAYGLDKK
Sbjct: 175 RIINEPTAAAIAYGLDKK 192
Score = 118 bits (285), Expect = 3e-27
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP NTVFDAKRLIGR +S
Sbjct: 24 WQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFS 82
Query: 436 DQTVQHDVKFFPFKVVE-KNSKP--HVQYK 516
D +VQ D+KF+PFKV + KP V YK
Sbjct: 83 DASVQSDMKFWPFKVTPGQADKPMIFVNYK 112
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 206 GTVIGIDLGTTYSCVGATKMD 268
G IGIDLGTTYSCVG + D
Sbjct: 7 GPAIGIDLGTTYSCVGVWQHD 27
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 129 bits (312), Expect = 2e-30
Identities = 63/78 (80%), Positives = 70/78 (89%)
Frame = +3
Query: 528 DKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 707
+K F+ EEIS+MVL KM+E AEA+LG V +AVVTVPAYFND+QRQATKDAG ISGLNVM
Sbjct: 115 EKQFSAEEISSMVLIKMREIAEAFLGSPVKNAVVTVPAYFNDSQRQATKDAGVISGLNVM 174
Query: 708 RIINEPTAAAIAYGLDKK 761
RIINEPTAAAIAYGLDKK
Sbjct: 175 RIINEPTAAAIAYGLDKK 192
Score = 114 bits (275), Expect = 6e-26
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP NTVFDAKRLIGR +S
Sbjct: 24 WQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPTNTVFDAKRLIGRRYS 82
Query: 436 DQTVQHDVKFFPFKVVE-KNSKPHV 507
D +VQ D +PFKVV KP +
Sbjct: 83 DPSVQADKSHWPFKVVSGPGEKPMI 107
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 206 GTVIGIDLGTTYSCVGATKMD 268
G IGIDLGTTYSCVG + D
Sbjct: 7 GPAIGIDLGTTYSCVGVWQHD 27
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 128 bits (308), Expect = 6e-30
Identities = 62/78 (79%), Positives = 70/78 (89%)
Frame = +3
Query: 528 DKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVM 707
+K FA EEIS+MVL KM+E AEA+LG V +AVVTVPAYFND+QRQATKDAG I+GLNV+
Sbjct: 115 EKQFAAEEISSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVL 174
Query: 708 RIINEPTAAAIAYGLDKK 761
RIINEPTAAAIAYGLDKK
Sbjct: 175 RIINEPTAAAIAYGLDKK 192
Score = 112 bits (269), Expect = 3e-25
Identities = 58/90 (64%), Positives = 70/90 (77%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWS 435
+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP NTVFDAKRLIGR +S
Sbjct: 24 WQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFS 82
Query: 436 DQTVQHDVKFFPFKVVEKNS-KPH--VQYK 516
D +VQ D + +PF ++ + KP V+YK
Sbjct: 83 DASVQSDRQLWPFTIISGTAEKPMIVVEYK 112
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 206 GTVIGIDLGTTYSCVGATKMD 268
G IGIDLGTTYSCVG + D
Sbjct: 7 GPAIGIDLGTTYSCVGVWQHD 27
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 124 bits (300), Expect = 5e-29
Identities = 60/82 (73%), Positives = 70/82 (85%)
Frame = +3
Query: 519 SQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGL 698
+ G K F+P +I A VLTKMKETAEAYLGK + AVVTVPAYFNDAQRQATKDAG I+GL
Sbjct: 155 ANGQK-FSPSQIGANVLTKMKETAEAYLGKSINKAVVTVPAYFNDAQRQATKDAGKIAGL 213
Query: 699 NVMRIINEPTAAAIAYGLDKKE 764
+V RIINEPTAAA++YG++ KE
Sbjct: 214 DVQRIINEPTAAALSYGMNNKE 235
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +1
Query: 277 IIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHD 456
+I N +G+R TPS VA Q GE L+G AK Q TNP NT+F +KRLIGR + D Q +
Sbjct: 76 VIENAEGSRTTPSVVAMNQKGELLVGTPAKRQAVTNPTNTIFGSKRLIGRRFDDPQTQKE 135
Query: 457 VKFFPFKVVE 486
+K P+K+V+
Sbjct: 136 MKMVPYKIVK 145
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 212 VIGIDLGTTYSCVGATKMDV*KSLPMTRETASHLHTWPSLKMVN 343
VIGIDLGTT SCV + + + E A T PS+ +N
Sbjct: 54 VIGIDLGTTNSCVSVMEGKTARVI----ENAEGSRTTPSVVAMN 93
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 124 bits (299), Expect = 7e-29
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 537 FAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRII 716
++P +I A +LTKMKETAEAYLGK VT AVVTVPAYFNDAQRQATKDAG I+GL+V RII
Sbjct: 165 YSPSQIGAFILTKMKETAEAYLGKSVTKAVVTVPAYFNDAQRQATKDAGRIAGLDVERII 224
Query: 717 NEPTAAAIAYGLDKKE 764
NEPTAAA++YG+ KE
Sbjct: 225 NEPTAAALSYGMTNKE 240
Score = 75.8 bits (178), Expect = 3e-14
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +1
Query: 274 EIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQH 453
++I N +G R TPS VAF GE L+G AK Q TNP NTV KRLIGR++ D Q
Sbjct: 80 KVIENAEGARTTPSVVAFNTKGELLVGTPAKRQAVTNPTNTVSGTKRLIGRKFDDPQTQK 139
Query: 454 DVKFFPFKVV 483
++K P+K+V
Sbjct: 140 EMKMVPYKIV 149
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +2
Query: 212 VIGIDLGTTYSCVGATKMDV*KSLPMTRETASHLHTWPSLKMVN 343
VIGIDLGTT SCV + P E A T PS+ N
Sbjct: 59 VIGIDLGTTNSCVAVME----GKNPKVIENAEGARTTPSVVAFN 98
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 110 bits (265), Expect = 9e-25
Identities = 52/92 (56%), Positives = 69/92 (75%)
Frame = +3
Query: 486 KEQQTSCSVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQ 665
+++ + ++ +K FA EEISA VL K+ + A +L KVT AV+TVPAYFND+QR
Sbjct: 169 RDENNNVKLECPAINKQFAAEEISAQVLRKLVDDASRFLNDKVTKAVITVPAYFNDSQRT 228
Query: 666 ATKDAGTISGLNVMRIINEPTAAAIAYGLDKK 761
ATKDAG I+GL V+RIINEPTAA++AYG D+K
Sbjct: 229 ATKDAGRIAGLEVLRIINEPTAASLAYGFDRK 260
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +1
Query: 259 KNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSD 438
+ G+ I+ N +G R TPS VA+T+ G+RL+G AK Q NPENT F KR IGR+ ++
Sbjct: 96 EGGKPTIVTNAEGQRTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMNE 155
Query: 439 QTVQHDVKFFPFKVV 483
V + K ++VV
Sbjct: 156 --VDEESKQVSYRVV 168
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 107 bits (258), Expect = 6e-24
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +3
Query: 531 KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMR 710
K FA EEISA VL K+ + A +L KVT AV+TVPAYFND+QR ATKDAG I+GL V+R
Sbjct: 184 KQFAAEEISAQVLRKLVDDASRFLNDKVTKAVITVPAYFNDSQRTATKDAGRIAGLEVLR 243
Query: 711 IINEPTAAAIAYGLDKK 761
IINEPTAA++AYG ++K
Sbjct: 244 IINEPTAASLAYGFERK 260
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +1
Query: 259 KNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSD 438
+ G+ I+ N +G R TPS VA+T+ +RL+G AK Q NPENT F KR IGR ++
Sbjct: 96 EGGKPTIVTNAEGQRTTPSVVAYTKSKDRLVGQIAKRQAVVNPENTFFSVKRFIGRRMNE 155
Query: 439 QTVQHDVKFFPFKVVE 486
V + K ++V++
Sbjct: 156 --VAEESKQVSYRVIK 169
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = +3
Query: 531 KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMR 710
+ F P ++ M+L+ +K AE L V + +P YF D QR+A DA TI+GL+ +R
Sbjct: 110 RAFTPTQVMGMMLSNLKGIAEKNLNTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLR 169
Query: 711 IINEPTAAAIAYGLDKKE 764
+I+E TA A+AYG+ K +
Sbjct: 170 LIHETTATALAYGIYKTD 187
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/89 (37%), Positives = 50/89 (56%)
Frame = +1
Query: 220 YRFGYHLLMCRCYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTV 399
+ FG + + ++++ ND+ NR TP+ V F D +R IG A NP+N++
Sbjct: 6 FDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFG-DKQRFIGTAGAASTMMNPKNSI 64
Query: 400 FDAKRLIGREWSDQTVQHDVKFFPFKVVE 486
KRLIGR++SD +Q D+K PF V E
Sbjct: 65 SQIKRLIGRQFSDPELQRDIKSLPFSVTE 93
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = +3
Query: 531 KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMR 710
+ F P ++ M+L+ +K AE L V + +P YF D QR+A DA TI+GL+ +
Sbjct: 110 RAFTPTQVMGMMLSNLKGIAEKNLNTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLH 169
Query: 711 IINEPTAAAIAYGLDKKE 764
+I+E TA A+AYG+ K +
Sbjct: 170 LIHETTATALAYGIYKTD 187
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/89 (37%), Positives = 50/89 (56%)
Frame = +1
Query: 220 YRFGYHLLMCRCYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTV 399
+ FG + + ++++ ND+ NR TP+ V F D +R IG A NP+N++
Sbjct: 6 FDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFG-DKQRFIGTAGAASTMMNPKNSI 64
Query: 400 FDAKRLIGREWSDQTVQHDVKFFPFKVVE 486
KRLIGR++SD +Q D+K PF V E
Sbjct: 65 SQIKRLIGRQFSDPELQRDIKSLPFSVTE 93
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = +3
Query: 531 KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMR 710
+ F P ++ M+L+ +K AE L V + +P YF D QR+A DA TI+GL+ +
Sbjct: 110 RAFTPTQVMGMMLSNLKGIAEKNLNTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLH 169
Query: 711 IINEPTAAAIAYGLDKKE 764
+I+E TA A+AYG+ K +
Sbjct: 170 LIHETTATALAYGIYKTD 187
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/89 (37%), Positives = 50/89 (56%)
Frame = +1
Query: 220 YRFGYHLLMCRCYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTV 399
+ FG + + ++++ ND+ NR TP+ V F D +R IG A NP+N++
Sbjct: 6 FDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFG-DKQRFIGTAGAASTMMNPKNSI 64
Query: 400 FDAKRLIGREWSDQTVQHDVKFFPFKVVE 486
KRLIGR++SD +Q D+K PF V E
Sbjct: 65 SQIKRLIGRQFSDPELQRDIKSLPFSVTE 93
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 486 KEQQTSCSVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQ 665
++ + + ++ G V++ EE+ AM+L AE + V VV+VP YF A+R+
Sbjct: 120 EDSRGAVGIKIDDGSTVYSVEELLAMILGYASNLAEFHAKIPVKDMVVSVPPYFGQAERR 179
Query: 666 ATKDAGTISGLNVMRIINEPTAAAIAYGLDK 758
A ++G+NV+ ++NE + AA+ YG+DK
Sbjct: 180 GLIQASQLAGVNVLSLVNEHSGAALQYGIDK 210
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +1
Query: 271 VEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQ 450
+ + N+ R +P+ VAF Q G+RL+G+ A P + ++G+ +
Sbjct: 50 ISVAINEMSKRKSPALVAF-QSGDRLLGEEAAGITARYPNKVYSQLRDMVGKPFKHVKDF 108
Query: 451 HDVKFFPFKVVE 486
D + PF +VE
Sbjct: 109 IDSVYLPFDIVE 120
>At1g11660.1 68414.m01339 heat shock protein, putative strong
similarity to gb|Z70314 heat-shock protein from
Arabidopsis thaliana and is a member of the PF|00012
Hsp70 protein family
Length = 773
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/76 (38%), Positives = 50/76 (65%)
Frame = +3
Query: 537 FAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRII 716
F+P +I M+L+ +K+ AE L V+ V+ +P+YF ++QR A DA I+GL +R++
Sbjct: 112 FSPVQILGMLLSHLKQIAEKSLKTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLM 171
Query: 717 NEPTAAAIAYGLDKKE 764
++ TA A+ YG+ K +
Sbjct: 172 HDSTATALGYGIYKTD 187
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/87 (35%), Positives = 55/87 (63%)
Frame = +1
Query: 259 KNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSD 438
K ++++ ND+ NR P+ V+F + +R +G AA T +P++T+ KRLIGR++ +
Sbjct: 19 KQRGIDVLLNDESNRENPAMVSFGEK-QRFMGAAAAASATMHPKSTISQLKRLIGRKFRE 77
Query: 439 QTVQHDVKFFPFKVVEKNSKPHVQYKL 519
VQ+D++ FPF+ E +S +Q +L
Sbjct: 78 PDVQNDLRLFPFETSE-DSDGGIQIRL 103
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +3
Query: 543 PEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINE 722
PEE+ A+ L +++ AEA L + V + V+TVP F+ Q + A ++GL+V+R++ E
Sbjct: 143 PEEVLAIFLVELRLMAEAQLKRPVRNVVLTVPVSFSRFQLTRFERACAMAGLHVLRLMPE 202
Query: 723 PTAAAIAY 746
PTA A+ Y
Sbjct: 203 PTAIALLY 210
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN----TVFDAKRLIG 423
+ +V I+ N + ++ S+V F + + NQL E +F+ KRL+G
Sbjct: 45 WNGSQVHILRNTRNQKLIKSFVTFKDE---VPAGGVSNQLAHEQEMLTGAAIFNMKRLVG 101
Query: 424 REWSDQTVQHDVKFFPFKV 480
R +D V H K PF V
Sbjct: 102 RVDTDPVV-HASKNLPFLV 119
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +3
Query: 543 PEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINE 722
PEE+ A+ L +++ AEA L + V + V+TVP F+ Q + A ++GL+V+R++ E
Sbjct: 143 PEEVLAIFLVELRLMAEAQLKRPVRNVVLTVPVSFSRFQLTRFERACAMAGLHVLRLMPE 202
Query: 723 PTAAAIAY 746
PTA A+ Y
Sbjct: 203 PTAIALLY 210
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 256 YKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN----TVFDAKRLIG 423
+ +V I+ N + ++ S+V F + + NQL E +F+ KRL+G
Sbjct: 45 WNGSQVHILRNTRNQKLIKSFVTFKDE---VPAGGVSNQLAHEQEMLTGAAIFNMKRLVG 101
Query: 424 REWSDQTVQHDVKFFPFKV 480
R +D V H K PF V
Sbjct: 102 RVDTDPVV-HASKNLPFLV 119
>At5g37470.1 68418.m04509 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 629
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 686 CTSIF-GCLTLSIIEISRHSNNSMSNLFSKVSLSSLLHFSQNHSRDFFR 543
C F CLTL +++ RHS+N + +S LS L +N + + R
Sbjct: 49 CADNFPNCLTLMFLKLYRHSSNGVIRFYSLYLLSETLVVFRNRNWELSR 97
>At4g32030.2 68417.m04559 expressed protein
Length = 204
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 492 QQTSCSVQTSQGDKVFAPEEISAMVLTKMKETAEAY 599
+Q SCS T G KVF EI++ ++K+ ++
Sbjct: 115 RQASCSTSTGSGSKVFPTNEITSCFSKRLKKRKSSF 150
>At4g32030.1 68417.m04560 expressed protein
Length = 253
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 492 QQTSCSVQTSQGDKVFAPEEISAMVLTKMKETAEAY 599
+Q SCS T G KVF EI++ ++K+ ++
Sbjct: 115 RQASCSTSTGSGSKVFPTNEITSCFSKRLKKRKSSF 150
>At1g69150.1 68414.m07911 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 421 GREWSDQTVQHDVKFFPFKVVEKNSKPHVQYKLH 522
G+E D+ + + PFKV+++N+ HV +K H
Sbjct: 316 GKEMKDEPEEEE-DILPFKVIDENTIQHVSHKEH 348
>At5g37620.1 68418.m04531 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 516 FVLNMRFAVLFNDLEGEELNIMLYSLVTPFTTNQTLGIKDSVFR 385
+V+++R A + + LE + LY T +T G KDSVFR
Sbjct: 474 YVIDVRCAAISDTLEYKSHQHSLYYYSTTYTHCSRCGKKDSVFR 517
>At5g37460.1 68418.m04508 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 622
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 686 CTSIF-GCLTLSIIEISRHSNNSMSNLFSKVSLSSLLHFSQN 564
C + F CLTL +++ RHS+N + S LS L +N
Sbjct: 47 CANNFPNCLTLMFLKLYRHSSNDVIRFHSLYLLSETLAVFRN 88
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,280,389
Number of Sequences: 28952
Number of extensions: 325102
Number of successful extensions: 886
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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