Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00450
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 139 2e-33
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 134 4e-32
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 125 3e-29
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 125 3e-29
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 124 8e-29
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 124 8e-29
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 119 2e-27
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 118 4e-27
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 95 4e-20
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 95 4e-20
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 80 1e-15
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 64 9e-11
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 31 1.1
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 30 1.4
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 30 1.4
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 29 4.3
Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 5.7
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 27 9.9
U50135-3|AAA93454.1| 329|Caenorhabditis elegans Squashed vulva ... 27 9.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 139 bits (337), Expect = 2e-33
Identities = 62/87 (71%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 430
+P+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+S
Sbjct: 62 NPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Query: 431 SMVLTKMKETAEAYLGKTVQNAVITVP 511
SMVL KMKETAEA+LG TV++AV+TVP
Sbjct: 122 SMVLLKMKETAEAFLGTTVKDAVVTVP 148
Score = 123 bits (297), Expect = 1e-28
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 252 MTP 260
M P
Sbjct: 61 MNP 63
Score = 113 bits (273), Expect = 9e-26
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKG GERNVLIFDLGGGT
Sbjct: 149 AYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERNVLIFDLGGGT 205
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 134 bits (325), Expect = 4e-32
Identities = 60/87 (68%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 430
+P+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+S
Sbjct: 62 NPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Query: 431 SMVLTKMKETAEAYLGKTVQNAVITVP 511
SMVL KMK+TAEA+L TV++AV+TVP
Sbjct: 122 SMVLLKMKKTAEAFLEPTVKDAVVTVP 148
Score = 123 bits (297), Expect = 1e-28
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 252 MTP 260
M P
Sbjct: 61 MNP 63
Score = 112 bits (269), Expect = 3e-25
Identities = 53/56 (94%), Positives = 54/56 (96%)
Frame = +1
Query: 514 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
YFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKG GERNVLIFDLGGGT
Sbjct: 150 YFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERNVLIFDLGGGT 205
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 125 bits (302), Expect = 3e-29
Identities = 57/86 (66%), Positives = 70/86 (81%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 433
+P NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+
Sbjct: 62 NPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISA 121
Query: 434 MVLTKMKETAEAYLGKTVQNAVITVP 511
MVL KMKETAE YLG TV++AVITVP
Sbjct: 122 MVLQKMKETAETYLGHTVKDAVITVP 147
Score = 107 bits (258), Expect = 6e-24
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 252 MTP 260
P
Sbjct: 61 RNP 63
Score = 99 bits (238), Expect = 2e-21
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK E+NVLIFDLGGGT
Sbjct: 148 AYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGIQDEKNVLIFDLGGGT 204
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 125 bits (302), Expect = 3e-29
Identities = 57/86 (66%), Positives = 70/86 (81%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 433
+P NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+
Sbjct: 62 NPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISA 121
Query: 434 MVLTKMKETAEAYLGKTVQNAVITVP 511
MVL KMKETAE YLG TV++AVITVP
Sbjct: 122 MVLQKMKETAETYLGHTVKDAVITVP 147
Score = 107 bits (258), Expect = 6e-24
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 252 MTP 260
P
Sbjct: 61 RNP 63
Score = 99 bits (238), Expect = 2e-21
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK E+NVLIFDLGGGT
Sbjct: 148 AYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGIQDEKNVLIFDLGGGT 204
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 124 bits (298), Expect = 8e-29
Identities = 55/86 (63%), Positives = 68/86 (79%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 433
+P NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 434 MVLTKMKETAEAYLGKTVQNAVITVP 511
MVL KMKE AE+YLGK V+NAV+TVP
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVP 178
Score = 106 bits (254), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLDKK GERN+L+FDLGGGT
Sbjct: 179 AYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGERNILVFDLGGGT 234
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMTP 260
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ + P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 124 bits (298), Expect = 8e-29
Identities = 55/86 (63%), Positives = 68/86 (79%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 433
+P NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 434 MVLTKMKETAEAYLGKTVQNAVITVP 511
MVL KMKE AE+YLGK V+NAV+TVP
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVP 178
Score = 106 bits (254), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLDKK GERN+L+FDLGGGT
Sbjct: 179 AYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGERNILVFDLGGGT 234
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMTP 260
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ + P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 119 bits (286), Expect = 2e-27
Identities = 54/86 (62%), Positives = 69/86 (80%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 433
+P NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S+
Sbjct: 62 NPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISA 121
Query: 434 MVLTKMKETAEAYLGKTVQNAVITVP 511
MVL KMKETAEA LG +V++AVITVP
Sbjct: 122 MVLQKMKETAEAVLGHSVRDAVITVP 147
Score = 107 bits (257), Expect = 8e-24
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 252 MTP 260
P
Sbjct: 61 RNP 63
Score = 101 bits (243), Expect = 4e-22
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK T E+N+LIFDLGGGT
Sbjct: 148 AYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGITDEKNILIFDLGGGT 204
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 118 bits (284), Expect = 4e-27
Identities = 53/86 (61%), Positives = 66/86 (76%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 433
+P NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+
Sbjct: 90 NPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSA 149
Query: 434 MVLTKMKETAEAYLGKTVQNAVITVP 511
MVLTKMK+ AE+YLG V+NAV+TVP
Sbjct: 150 MVLTKMKQIAESYLGHEVKNAVVTVP 175
Score = 103 bits (247), Expect = 1e-22
Identities = 48/57 (84%), Positives = 55/57 (96%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFND+Q+QATKDAG+I+GLNV+RIINEPTAAAIAYGLDKK GERN+L+FDLGGGT
Sbjct: 176 AYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLDKK-DGERNILVFDLGGGT 231
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/59 (76%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMTP 260
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ + P
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFNDSQRQATKDAG ISGLNVLR+INEPTAAA+AYGLD K G++ + ++DLGGGT
Sbjct: 173 AYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLD-KDAGDKIIAVYDLGGGT 228
Score = 78.2 bits (184), Expect = 5e-15
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMV 439
NT+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V + V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVGAFV 148
Query: 440 LTKMKETAEAYLGKTVQNAVITVP 511
L KMKETAE+YLG TV N V+TVP
Sbjct: 149 LMKMKETAESYLGTTVNNPVVTVP 172
Score = 60.9 bits (141), Expect = 9e-10
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +3
Query: 78 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFNDSQRQATKDAG ISGLNVLR+INEPTAAA+AYGLD K G++ + ++DLGGGT
Sbjct: 173 AYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLD-KDAGDKIIAVYDLGGGT 228
Score = 81.4 bits (192), Expect = 6e-16
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMV 439
NT+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V + V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVGAFV 148
Query: 440 LTKMKETAEAYLGKTVQNAVITVP 511
L KMKETAE+YLG TV NAV+TVP
Sbjct: 149 LMKMKETAESYLGTTVNNAVVTVP 172
Score = 60.9 bits (141), Expect = 9e-10
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +3
Query: 78 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/57 (64%), Positives = 46/57 (80%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFN +QR+AT++A I+GL VLRI+NEPTAAAIAY L + RN+LI+DLGGGT
Sbjct: 145 AYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSLKGQRLSRRNILIYDLGGGT 201
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 439
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 440 LTKMKETAEAYLGKTVQNAVITVP 511
L +K AE LG V++AVITVP
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVP 144
Score = 61.3 bits (142), Expect = 7e-10
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 87 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMTPT 263
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 264 TQYSMPNV 287
+ + + +
Sbjct: 62 SLFDVKRI 69
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/57 (64%), Positives = 46/57 (80%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
AYFN +QR+AT++A I+GL VLRI+NEPTAAAIAY L + RN+LI+DLGGGT
Sbjct: 145 AYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSLKGQRLSRRNILIYDLGGGT 201
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 439
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 440 LTKMKETAEAYLGKTVQNAVITVP 511
L +K AE LG V++AVITVP
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVP 144
Score = 61.3 bits (142), Expect = 7e-10
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 87 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMTPT 263
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 264 TQYSMPNV 287
+ + + +
Sbjct: 62 SLFDVKRI 69
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 64.1 bits (149), Expect = 9e-11
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 681
A FN+ QR T A I+ + V R+I+EPTAAA+AYGL KK G NV++ DLGGGT
Sbjct: 183 AEFNEKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKK-QGVENVVVVDLGGGT 238
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEE 424
+P TI+DAKR IGR FE + +D K +PF++ D GK ++ K +PEE
Sbjct: 94 NPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEE 153
Query: 425 VSSMVLTKMKETAEAYLGKTVQNAVITVP 511
+ S+++ +K A +LG T+ VI+ P
Sbjct: 154 IGSLIIGYLKSAAAKHLGVTLGQVVISCP 182
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 63 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 227
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 228 DAAKNQVAMTP 260
A Q P
Sbjct: 85 TRATEQQEHNP 95
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 439
NT+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V + +
Sbjct: 62 NTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAAL 121
Query: 440 LTKMKETAEAYLG--KTVQNAVITVP 511
LTK++ E+ L K V + V+ VP
Sbjct: 122 LTKLRTIVESQLSDVKKVSDCVLAVP 147
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Frame = +1
Query: 487 AECSYHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE-----RN 651
++C +YF D QR+A A +GLN LRI+NE TA A+AYG+ K+ E RN
Sbjct: 140 SDCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNETTAIALAYGIYKQDLPEEDAKSRN 199
Query: 652 VLIFDLGGGTSTCPSL 699
V+ D+ G +ST SL
Sbjct: 200 VVFLDI-GHSSTQASL 214
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 248
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAV 56
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = +1
Query: 514 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER--NVLIFDLGGGTS 684
YF ++R A + A ++GL VL++IN+ TAAA+++G+ +K GE+ ++++D+G +
Sbjct: 171 YFTPAERLAVERAAQMAGLTVLQLINDGTAAALSHGIFRRKEIGEKPQRLMVYDMGAAKT 230
Query: 685 T 687
T
Sbjct: 231 T 231
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 87 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAA 236
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/61 (36%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = +1
Query: 514 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER--NVLIFDLGGGTS 684
+ N ++R+A A I+GLN+L+++N+ +AAA+ YG+ +K E+ ++LI+D+G +
Sbjct: 155 FLNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRRKEITEKPTHMLIYDMGAVKT 214
Query: 685 T 687
T
Sbjct: 215 T 215
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 LIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 463
+I RK D K +PF D + + YK E+K + E + +M+L K+
Sbjct: 80 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 137
Query: 464 EAYLGKTVQNAVITVP 511
EAY +TV++ VITVP
Sbjct: 138 EAYADQTVKDVVITVP 153
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/61 (36%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = +1
Query: 514 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER--NVLIFDLGGGTS 684
+ N ++R+A A I+GLN+L+++N+ +AAA+ YG+ +K E+ ++LI+D+G +
Sbjct: 171 FLNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRRKEITEKPTHMLIYDMGAVKT 230
Query: 685 T 687
T
Sbjct: 231 T 231
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 LIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 463
+I RK D K +PF D + + YK E+K + E + +M+L K+
Sbjct: 96 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 153
Query: 464 EAYLGKTVQNAVITVP 511
EAY +TV++ VITVP
Sbjct: 154 EAYADQTVKDVVITVP 169
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 203 HRHRASHRR--CRQEPGGDDPNNTIFDAKRLIGR-KFEDATVQADM 331
H+HR SHR Q+ GD+ NN + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 233 RQEPGGDDPNNTIFDAKRLIGRKFEDATVQAD 328
++ GDDP+ F +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 266 CCWGHRHLVLGGISDETLGVCERNIRRSGPVA 171
CC G H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/54 (22%), Positives = 29/54 (53%)
Frame = +3
Query: 165 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMTPTTQYSMPNVSSDVSSKMLLCKP 326
D G+ ++V D +++IG+ + + T+Y++ + SS+++L +P
Sbjct: 12 DIGDGLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical
protein W02B8.4 protein.
Length = 733
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +2
Query: 266 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 445
T+ AKR I R E T+++D PF +++ +K A K +D+ + ++L
Sbjct: 205 TVRRAKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVK-ALKKKDRI---SKWQDIILR 260
Query: 446 KMKETAEAYLGKTVQN 493
KE+++ K ++N
Sbjct: 261 IQKESSQLRKRKEIEN 276
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 GRWRSSPTTR-ATGPLRLMLRSQTPSVSSEMPPRT 243
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 179 DHSVLCCVHRHRASHRRCRQEPGGDD 256
D V+CCVH R S+ + Q+ DD
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDD 48
>U50135-3|AAA93454.1| 329|Caenorhabditis elegans Squashed vulva
protein 7 protein.
Length = 329
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 83 CFCHFVFLISLVTCS*NNSANVRDC 9
C C FV SLV C+ +NSA C
Sbjct: 235 CICGFVLNYSLVLCTHHNSALTTTC 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,862,768
Number of Sequences: 27780
Number of extensions: 411669
Number of successful extensions: 1473
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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