Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00441
         (340 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   2.4  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   4.2  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    22   5.5  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    22   5.5  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    22   7.3  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    22   7.3  
EF588628-1|ABQ96818.1|  176|Anopheles gambiae transposase protein.     21   9.6  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    21   9.6  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    21   9.6  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 205 SHPV*FRAGLDARTIYI 255
           SHPV F  G+  RT+Y+
Sbjct: 184 SHPVSFSEGIGNRTLYM 200


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 197 KKLQTKCTKSSDRCC 153
           KK+Q K TK+ + CC
Sbjct: 193 KKIQIKHTKTKNGCC 207


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 95  HFRTVNLKSVGSQSA-PRDSSNNGRLTLYILFVVFCRIHILCS 220
           HF   +  +V  +S+   + S  G +   + FVV+C I I+C+
Sbjct: 360 HFSFSDKGNVALESSVDHEWSKFGLVLNRLSFVVYCVIFIICA 402


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -2

Query: 303 KFALRSVSAPKLTSNNNIYCASIEPGAELHRM*ILQKTTNKMYKVKR 163
           K  LR++ A  L+S     CA   PGA  +   +++   +   KVK+
Sbjct: 446 KLQLRTMLAVLLSSYEFATCAKSTPGALSNAHTVIKPQGDLWLKVKK 492


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 203 IHILCSSAPGSMLAQYILL 259
           +H  C +AP  +L  Y+L+
Sbjct: 248 VHAFCEAAPMLLLQLYVLV 266


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 155 CCCPGAHFG 129
           CCC G+H G
Sbjct: 288 CCCRGSHCG 296


>EF588628-1|ABQ96818.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 112 IYCSKVYIVYSTTFSNEYIHIHL*DDKVRPY 20
           +YC KV+     T SN   H++L   K  PY
Sbjct: 25  LYCLKVFKYTKGTISNLKRHLNL-VHKTVPY 54


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -3

Query: 209 CEFYKKLQTKCTKSSDR-CCCCPG 141
           C    +LQ  CTK   + C C PG
Sbjct: 52  CADLNELQKPCTKQCIQGCFCKPG 75


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = -3

Query: 245 VRASSPARNYTGCEFYKKLQTKCTKSSDRCCCCPGAHFGN 126
           VR + P+R    C     +   C     R CC  G   G+
Sbjct: 422 VRINIPSRRCYRCWQTDHISQDCCGPDRRDCCLRGGEKGH 461


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,273
Number of Sequences: 2352
Number of extensions: 7442
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)