Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00441
         (340 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    21   3.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   4.1  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   5.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   5.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   7.1  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -3

Query: 245 VRASSPARNYTGCEFYKKLQTKCTKSSDRCCCCPG 141
           +R   P+R + G EF K+ +    K        PG
Sbjct: 80  IRPGQPSRQHAGFEFGKEYKNGFIKGQSEVQRGPG 114


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 305 KNLHCGRYQHRN 270
           +N  CGRY ++N
Sbjct: 415 RNTRCGRYHNQN 426


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 82  YILYTL*NSKSEICRFPKCAPGQQQQRSLDFVHF 183
           Y LYT  N   E+C     A    Q+  ++F+ F
Sbjct: 79  YFLYTSKNDNEEVCGIYFLAE-PDQKIEINFITF 111


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 31  LYHLKDGYEYIRSKMLCYI 87
           L+ L    EY+RSK++ ++
Sbjct: 175 LHDLDQSQEYVRSKLVDFL 193


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = -3

Query: 158 CCCCPG 141
           C CCPG
Sbjct: 406 CACCPG 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,873
Number of Sequences: 438
Number of extensions: 1761
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)