Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00439
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.5  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   4.5  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   4.5  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   4.5  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 414 SSFFFNFITDLINFFVYFIPINI 346
           +++F N    L NFF + +P+ I
Sbjct: 347 TTYFLNTYPHLFNFFEFSVPLAI 369


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +3

Query: 204 LQQLSS*F*ELHQDG*LFHFYEDWKSSSCWTWRWSHSSTHCKPKRLH 344
           L++L     EL  +  LFH   D  +  CW      ++T      LH
Sbjct: 380 LEKLYKDLLELSDETELFHLGGDEVNLECWAQHLQKTTTFMNYTDLH 426


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 189 QILVKLQQLSS*F*ELHQDG*LFHFYEDWKSSSCW 293
           ++L  L+ + S   +L  +  LFH   D  + +CW
Sbjct: 344 EVLQVLEDIYSDLLDLTDNNELFHLGSDEVNLTCW 378


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 346 DINWDKINKKVDKISDKIEKEATGKS 423
           DIN D   K +D +   ++    GKS
Sbjct: 132 DINMDYFKKCIDPVDKVLQDAKIGKS 157


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 346 DINWDKINKKVDKISDKIEKEATGKS 423
           DIN D   K +D +   ++    GKS
Sbjct: 132 DINMDYFKKCIDPVDKVLQDAKIGKS 157


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 434 LKRSLFLSKVIHIIQQGLREDF 499
           +K SL L   +H I + L EDF
Sbjct: 69  IKESLRLYPSVHFISRKLGEDF 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,619
Number of Sequences: 336
Number of extensions: 2079
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)