Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00439
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         26   1.1  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        25   1.9  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    25   1.9  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   3.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.9  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -3

Query: 327 CNV*KNDSTSKSNSCYFSNL-HRNETVIHPDAVPKISCLVAEVLPISAM 184
           CN   N   + +N      L H N    HP  VPK  C   +++PIS +
Sbjct: 369 CNFPLNAHMNATNHAIVQTLVHLN----HPTKVPKPCCAPTKLIPISVL 413


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -3

Query: 336 FLACNV*KNDSTSKSNSCYFSNLHRNETVIHPDAVPKISCLVAEVLPISAM 184
           F  CN   N   + +N      L     ++HP  VPK  C   ++ PIS +
Sbjct: 370 FGECNFPLNTHMNATNHALIQTLVH---LMHPTRVPKPCCAPTKLNPISVL 417


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 279 SSSCWTWRW 305
           S SCW WRW
Sbjct: 4   SRSCWWWRW 12


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 84  IFIRNSNTD*HYTYLINKMRSFGKYL 7
           + ++ SN   ++T LI + RSFGKY+
Sbjct: 280 LVVKKSN---NHTVLITQARSFGKYV 302


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +2

Query: 89   N*KSVMAKPKNEDASEEA---KKIVDDAKNFIERAIADIGKTSATK 217
            N K+++   + E+  +E    KK+V+D K  I+  I D+ +    K
Sbjct: 982  NQKAMVLLEREEEQYKEVMRRKKVVEDDKKKIQAIITDLDEEKKKK 1027


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,664
Number of Sequences: 2352
Number of extensions: 8011
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)