Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00438
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036035-1|AAH36035.1|  979|Homo sapiens DHX36 protein protein.        31   4.3  
AJ577134-1|CAE11803.1|  994|Homo sapiens putative DExH/D RNA hel...    31   4.3  
AJ577133-1|CAE11802.1| 1008|Homo sapiens putative DExH/D RNA hel...    31   4.3  
AF217190-1|AAG36783.1| 1008|Homo sapiens MLEL1 protein protein.        31   4.3  
AB040921-1|BAA96012.1|  852|Homo sapiens KIAA1488 protein protein.     31   4.3  
BC013867-1|AAH13867.2|  510|Homo sapiens PALLD protein protein.        31   5.7  
AY211921-1|AAO65174.1|  294|Homo sapiens sarcoma antigen NY-SAR-...    31   5.7  
AF464873-1|AAL69964.1| 1106|Homo sapiens myoneurin protein.            31   5.7  
AB023209-1|BAA76836.1|  772|Homo sapiens KIAA0992 protein protein.     31   5.7  

>BC036035-1|AAH36035.1|  979|Homo sapiens DHX36 protein protein.
          Length = 979

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 594 LSEQVLLIALEVSDTFSEHMLKSGIDSSRNPNSP 493
           LS   L +   +   F+EH+L +G  SSRNP  P
Sbjct: 757 LSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDP 790


>AJ577134-1|CAE11803.1|  994|Homo sapiens putative DExH/D RNA
           helicase protein.
          Length = 994

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 594 LSEQVLLIALEVSDTFSEHMLKSGIDSSRNPNSP 493
           LS   L +   +   F+EH+L +G  SSRNP  P
Sbjct: 772 LSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDP 805


>AJ577133-1|CAE11802.1| 1008|Homo sapiens putative DExH/D RNA
           helicase protein.
          Length = 1008

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 594 LSEQVLLIALEVSDTFSEHMLKSGIDSSRNPNSP 493
           LS   L +   +   F+EH+L +G  SSRNP  P
Sbjct: 786 LSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDP 819


>AF217190-1|AAG36783.1| 1008|Homo sapiens MLEL1 protein protein.
          Length = 1008

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 594 LSEQVLLIALEVSDTFSEHMLKSGIDSSRNPNSP 493
           LS   L +   +   F+EH+L +G  SSRNP  P
Sbjct: 786 LSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDP 819


>AB040921-1|BAA96012.1|  852|Homo sapiens KIAA1488 protein protein.
          Length = 852

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 594 LSEQVLLIALEVSDTFSEHMLKSGIDSSRNPNSP 493
           LS   L +   +   F+EH+L +G  SSRNP  P
Sbjct: 630 LSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDP 663


>BC013867-1|AAH13867.2|  510|Homo sapiens PALLD protein protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 579 APVQTVEFPVIMLNSILNSNCPRFSYKTR-ARRTAGSDSRRTHEPQHP 719
           A +Q +E  +     +LN+  PR +Y+ R ARR  G+DS      Q P
Sbjct: 30  AVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEP 77


>AY211921-1|AAO65174.1|  294|Homo sapiens sarcoma antigen NY-SAR-77
           protein.
          Length = 294

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 579 APVQTVEFPVIMLNSILNSNCPRFSYKTR-ARRTAGSDSRRTHEPQHP 719
           A +Q +E  +     +LN+  PR +Y+ R ARR  G+DS      Q P
Sbjct: 32  AVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEP 79


>AF464873-1|AAL69964.1| 1106|Homo sapiens myoneurin protein.
          Length = 1106

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 579 APVQTVEFPVIMLNSILNSNCPRFSYKTR-ARRTAGSDSRRTHEPQHP 719
           A +Q +E  +     +LN+  PR +Y+ R ARR  G+DS      Q P
Sbjct: 679 AVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEP 726


>AB023209-1|BAA76836.1|  772|Homo sapiens KIAA0992 protein protein.
          Length = 772

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 579 APVQTVEFPVIMLNSILNSNCPRFSYKTR-ARRTAGSDSRRTHEPQHP 719
           A +Q +E  +     +LN+  PR +Y+ R ARR  G+DS      Q P
Sbjct: 292 AVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATVFNIQEP 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,416,693
Number of Sequences: 237096
Number of extensions: 2233233
Number of successful extensions: 4766
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4766
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)