Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00438
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4717|AAF57127.1| 1315|Drosophila melanogaster CG1744-PA...    31   1.6  
AY119443-1|AAM50097.1|  689|Drosophila melanogaster AT03044p pro...    30   3.8  
AE014134-204|AAF51416.2|  689|Drosophila melanogaster CG4552-PA ...    30   3.8  

>AE014297-4717|AAF57127.1| 1315|Drosophila melanogaster CG1744-PA
            protein.
          Length = 1315

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 344  FYKKKLEMFLCSIKKYWDLDTVLSAFFNYLCAAYGKGN 231
            F+++K   ++CS  + W  DTV   F N  C  YG+ N
Sbjct: 1224 FWQRKRRQYICS-SQTWT-DTVFRTFMNSPCQVYGRHN 1259


>AY119443-1|AAM50097.1|  689|Drosophila melanogaster AT03044p
           protein.
          Length = 689

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 314 CSIKKYWDLDTVLSAFFNYLCAAYGKGND 228
           CS+ +Y+ L T  S   +YL A YGK ND
Sbjct: 263 CSLAQYYALKTPTSFKTDYLKALYGKQND 291


>AE014134-204|AAF51416.2|  689|Drosophila melanogaster CG4552-PA
           protein.
          Length = 689

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 314 CSIKKYWDLDTVLSAFFNYLCAAYGKGND 228
           CS+ +Y+ L T  S   +YL A YGK ND
Sbjct: 263 CSLAQYYALKTPTSFKTDYLKALYGKQND 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,787,695
Number of Sequences: 53049
Number of extensions: 694834
Number of successful extensions: 1514
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)