Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00437
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    60   2e-11
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    60   2e-11
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    52   7e-09
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   2.0  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   2.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.0  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 59.7 bits (138), Expect = 2e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 586 INEPTAAALAYGLDKNLKGERNVLIFDLGGGT 681
           INEPTAAA+AYGLDK  + ERNVLIFDLGGGT
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGT 32



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 669 GWRNFDVSVLTIDEGSLFEVKSTAGD 746
           G   FDVS+LTI+EG +FEVK+TAGD
Sbjct: 29  GGGTFDVSLLTIEEG-IFEVKATAGD 53


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 59.7 bits (138), Expect = 2e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 586 INEPTAAALAYGLDKNLKGERNVLIFDLGGGT 681
           INEPTAAA+AYGLDK  + ERNVLIFDLGGGT
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGT 32



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 669 GWRNFDVSVLTIDEGSLFEVKSTAGD 746
           G   FDVS+LTI+EG +FEVK+TAGD
Sbjct: 29  GGGTFDVSLLTIEEG-IFEVKATAGD 53


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 51.6 bits (118), Expect = 7e-09
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +1

Query: 586 INEPTAAALAYGLDKNLKGERNVLIFDLGGGT 681
           INEPTAAA+AYGLDK    E+N+L++DLGGGT
Sbjct: 1   INEPTAAAIAYGLDKK-GAEQNILVYDLGGGT 31



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 669 GWRNFDVSVLTIDEGSLFEVKSTAGD 746
           G   FDVS+LTID G +FEV +T+GD
Sbjct: 28  GGGTFDVSILTIDNG-VFEVVATSGD 52


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 105 KSIPIAGILNINYCRYFFHNKQYITRRK 22
           K I +  I+  + CRY FHN +++   K
Sbjct: 18  KYILLMDIVAADDCRYKFHNSRWMVAGK 45


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 105 KSIPIAGILNINYCRYFFHNKQYITRRK 22
           K I +  I+  + CRY FHN +++   K
Sbjct: 18  KYILLMDIVAADDCRYKFHNSRWMVAGK 45


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 90  AGILNINYCRYFFHNKQYITRRKTFQF 10
           AG   INY   F   KQY+ +++   F
Sbjct: 346 AGFFPINYTLVFSVLKQYVMQQQVKNF 372


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 541 TKDAGAIAGLNVLRIINEPTAA 606
           TKDAG ++   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,919
Number of Sequences: 336
Number of extensions: 3645
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)