Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00432
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 135 5e-33
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 128 9e-31
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 117 2e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 110 2e-25
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 82 8e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 50 3e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 44 2e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 29 0.46
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.80
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.2
SPBC1A4.06c |||mitochondrial matrix protein import protein|Schiz... 26 4.2
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 25 7.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 7.4
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 9.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 135 bits (327), Expect = 5e-33
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 433
+NP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S G P ++V YKGE KTF PEE+S
Sbjct: 59 MNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEIS 118
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
SMVL KM+ETAEAYLG V +AV+T P
Sbjct: 119 SMVLMKMRETAEAYLGGKVTDAVVTVP 145
Score = 106 bits (254), Expect = 3e-24
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +3
Query: 90 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP 263
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 83.8 bits (198), Expect = 2e-17
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 633
VPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+
Sbjct: 144 VPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDR 185
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 128 bits (308), Expect = 9e-31
Identities = 57/87 (65%), Positives = 71/87 (81%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 433
+NP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ G P I+V +KGE KTF PEE+S
Sbjct: 59 MNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEIS 118
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
SMVL KM+E+AEA+LG V +AV+T P
Sbjct: 119 SMVLLKMRESAEAFLGGKVTDAVVTVP 145
Score = 106 bits (254), Expect = 3e-24
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +3
Query: 90 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP 263
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 83.8 bits (198), Expect = 2e-17
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 633
VPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+
Sbjct: 144 VPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDR 185
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 117 bits (281), Expect = 2e-27
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 433
+NP NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S
Sbjct: 63 MNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEIS 122
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
+MVLTKMKE +EA L K V+ AVIT P
Sbjct: 123 AMVLTKMKEISEAKLNKRVEKAVITVP 149
Score = 94.3 bits (224), Expect = 1e-20
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +3
Query: 90 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP 263
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ A P
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
Score = 79.4 bits (187), Expect = 4e-16
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKR 636
VPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD +
Sbjct: 148 VPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAK 190
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 110 bits (264), Expect = 2e-25
Identities = 49/86 (56%), Positives = 66/86 (76%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVSS 436
NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D P ++V G+ K F PEE+S+
Sbjct: 93 NPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISA 152
Query: 437 MVLTKMKETAEAYLGKTVQNAVITFP 514
M+L+KMK+TAEAYLGK V +AV+T P
Sbjct: 153 MILSKMKQTAEAYLGKPVTHAVVTVP 178
Score = 94.7 bits (225), Expect = 1e-20
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP 263
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ P
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
Score = 85.4 bits (202), Expect = 7e-18
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKRVLENEM 654
VPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK E +
Sbjct: 177 VPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDTEKHI 225
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 81.8 bits (193), Expect = 8e-17
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 433
+NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 108 INPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIG 164
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
+L+KM+ETA YLGK V+NAV+T P
Sbjct: 165 GFILSKMRETASTYLGKDVKNAVVTVP 191
Score = 81.4 bits (192), Expect = 1e-16
Identities = 36/43 (83%), Positives = 41/43 (95%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKR 636
VPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDK+
Sbjct: 190 VPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK 232
Score = 68.5 bits (160), Expect = 8e-13
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 81 KXPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA* 257
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 258 TPTTQY 275
P +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 50.0 bits (114), Expect = 3e-07
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 633
+PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K
Sbjct: 148 IPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITK 189
Score = 48.8 bits (111), Expect = 7e-07
Identities = 20/54 (37%), Positives = 36/54 (66%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 8 VGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEA 61
Score = 40.7 bits (91), Expect = 2e-04
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 433
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
+ TK+K AEA L +V + VI+ P
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIP 149
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 496 CSYHVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKRVL 642
C VP YF D+QR+A + A +GL VL++I++P A +A + VL
Sbjct: 166 CVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVL 214
Score = 39.5 bits (88), Expect = 4e-04
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 251
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQL 79
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.5 bits (63), Expect = 0.46
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TPTT 269
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 270 QYSMPNV 290
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.80
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 85 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 180
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.2
Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Frame = -3
Query: 630 VKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEVRGNVITAFCTVLPR*ASAVSFI 451
V ++ + S+S S ++ + + F S + I++ T+L + S +
Sbjct: 576 VSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSL 635
Query: 450 FVSTMELTSSGKKVLSSPL-----------YATLILGXPPSLTTSKGQCFMSACTVASSN 304
+S+ + S +LSS + Y++ ++ +L +S +S+ VASS+
Sbjct: 636 MISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSS 695
Query: 303 LRPM 292
P+
Sbjct: 696 SSPI 699
>SPBC1A4.06c |||mitochondrial matrix protein import
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/49 (22%), Positives = 26/49 (53%)
Frame = -3
Query: 657 VHFVLQYPFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEVRG 511
VHF+ +K++ +SR++ +N+ + + GL L ++++ G
Sbjct: 272 VHFIESSEVLKSMDPSDNSRYLSFHQNITKDSISRLLNGLPLNLVKILG 320
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -1
Query: 263 WGSRHLVLGGISDETLGVCERNIRRSGPVALVVGD-DLHLPVLEDTNARVR 114
WGS +G + TLG+ + + + L+VGD LHL V ++ +A +R
Sbjct: 418 WGSIGWSVGAMFGATLGIKDSDAPHRRSI-LIVGDGSLHLTV-QEISATIR 466
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.4 bits (53), Expect = 7.4
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -3
Query: 459 SFIFVSTMELTSSGKKVLSSPLYATLILGXPPSLTTSKGQCFMSACTVASSNLRPMRRLA 280
S + S+ +TSS S+P+ ++ +L +T+S G + T +SS L +
Sbjct: 903 STVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTGLNTSTPIT-SSSVLNSSTPIT 961
Query: 279 SNIVLLGFTP 250
S+ VL TP
Sbjct: 962 SSTVLNSSTP 971
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -3
Query: 360 LTTSKGQCFMSACTVASSNLRPMRRLASNIVLLGFTPPGSWRHL 229
L S+ + ++S V +RP + + +IV+ GS++H+
Sbjct: 1173 LNASQAEAYLSKMQVGDLVIRPSSKGSDHIVVTWKVAEGSYQHI 1216
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,870,309
Number of Sequences: 5004
Number of extensions: 61470
Number of successful extensions: 216
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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