Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00432
(665 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 135 3e-32
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 135 3e-32
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 7e-29
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 113 1e-25
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 61 9e-10
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 59 3e-09
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.84
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_56695| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_49831| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 1.5
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.6
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 29 3.4
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 29 3.4
SB_43628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_12344| Best HMM Match : ATP-synt_B (HMM E-Value=1.9) 29 4.5
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 28 5.9
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 28 5.9
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 7.9
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 135 bits (327), Expect = 3e-32
Identities = 60/87 (68%), Positives = 71/87 (81%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 433
+NP NT+FDAKRLIGRKF+D V DM HWPF V+ +G PKI+V +KGE K+FFPEE+S
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
SMVLTKMKETAEAYLG V +AV+T P
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVP 147
Score = 125 bits (302), Expect = 3e-29
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 75 MAKXPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 255 *TP 263
P
Sbjct: 61 MNP 63
Score = 87.8 bits (208), Expect = 7e-18
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKRV 639
VPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDK+V
Sbjct: 146 VPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV 189
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 135 bits (327), Expect = 3e-32
Identities = 62/87 (71%), Positives = 74/87 (85%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVS 433
+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD PKI+V YKGE KTF EE+S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
SMVL KMKETAEAYLG+ V +AVIT P
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVP 147
Score = 120 bits (289), Expect = 1e-27
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +3
Query: 75 MAKXPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
M K PA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 255 *TP 263
P
Sbjct: 61 LNP 63
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 633
VPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK
Sbjct: 146 VPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDK 187
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 124 bits (299), Expect = 7e-29
Identities = 57/64 (89%), Positives = 59/64 (92%)
Frame = +3
Query: 75 MAKXPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
M K PA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 255 *TPT 266
PT
Sbjct: 61 MNPT 64
Score = 112 bits (270), Expect = 2e-25
Identities = 63/112 (56%), Positives = 72/112 (64%), Gaps = 25/112 (22%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEV- 430
+NP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G PK+KV YKGE KTFF EEV
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120
Query: 431 ------------------------SSMVLTKMKETAEAYLGKTVQNAVITFP 514
SSMVL KMKETAEAYLG V +AV+T P
Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKRV 639
VPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDK+V
Sbjct: 239 VPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKV 282
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2
Query: 425 EVSSMVLTKMKETAEAYLGKTVQNAVITFP 514
++SSMVL KMKETAEAYLG V +AV+T P
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAG 558
VPAYFNDSQRQATKDAG
Sbjct: 171 VPAYFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 113 bits (272), Expect = 1e-25
Identities = 53/86 (61%), Positives = 66/86 (76%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTFFPEEVSS 436
NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV P ++V K E KTF EE+S+
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISA 819
Query: 437 MVLTKMKETAEAYLGKTVQNAVITFP 514
MVLTKMKETAEAYLGK V +AV+T P
Sbjct: 820 MVLTKMKETAEAYLGKKVTHAVVTVP 845
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVA*TP 263
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ P
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Score = 81.0 bits (191), Expect = 8e-16
Identities = 36/43 (83%), Positives = 41/43 (95%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKR 636
VPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DK+
Sbjct: 844 VPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK 886
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGXPKIKVAYKGEDKTFFPEEVS 433
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
+M+ T++K TAE L V + VI+ P
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVP 204
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +1
Query: 493 ECSYHVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKRVLENE 651
+C VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ L +
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTD 250
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 248
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 60.9 bits (141), Expect = 9e-10
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +3
Query: 81 KXPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 255 *TP 263
P
Sbjct: 90 INP 92
Score = 60.9 bits (141), Expect = 9e-10
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGXPKIKVAYKGEDKTFFPEEV 430
+NP NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 431 SSMVLTKMKETAEAYLGKTVQNAVITFPRTSMTLKDKPQKMQVPSLA 571
V+ K++ AE L TV AV++ P +K + ++ SLA
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVKAASLA 195
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKR 636
VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL K+
Sbjct: 176 VPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK 218
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 59.3 bits (137), Expect = 3e-09
Identities = 38/66 (57%), Positives = 42/66 (63%), Gaps = 24/66 (36%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAI 615
VPA+FND+QRQATKDAGTI+GL+ VLRIINEPTAAAI
Sbjct: 45 VPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAI 104
Query: 616 AYGLDK 633
AYGLDK
Sbjct: 105 AYGLDK 110
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 380 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFP 514
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVIT P
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 627
VP +FN ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 112 VPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 374 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFP 514
P +K Y+ D TF PEE+ M+L + E + +++ V+T P
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 144 GKVEIIANDQGNRTTPSYVAFTDTERLI 227
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 153 EIIANDQGNRTTPSYVAFT-DTERL 224
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 LKIQNGKXTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 238
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 239 QEPGGVNPNNTIFDA 283
G++P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_56695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = -3
Query: 528 VIEVRGNVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGXPPSLTTS 349
VI V GNV+ V + + + +F+ ++ + V+S P++ ++ L PS+ T
Sbjct: 39 VISVLGNVLVCIACVASKRLHSYTSVFIVSLATSDILVGVVSVPVWISVQLNGEPSMVTM 98
Query: 348 KGQCFMSAC 322
M C
Sbjct: 99 PTMYMMWLC 107
>SB_49831| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 339
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = -3
Query: 528 VIEVRGNVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGXPPSLTTS 349
VI V GNV+ V + + + +F+ ++ + V+S P++ ++ L PS+ T
Sbjct: 39 VISVLGNVLVCIACVASKRLHSYTSVFIVSLATSDILVGVVSVPVWISVQLNGEPSMVTM 98
Query: 348 KGQCFMSAC 322
M C
Sbjct: 99 PTMYMMWLC 107
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 418 PRGSQFHGAYENEGNCRSLSWQNCAECSYHVPAYFN 525
PRG Q Y G+C S+S +NC + S+ V +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 374 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFPRTSMTLKDKPQKM 553
PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 655 PKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQMS 714
Query: 554 Q 556
Q
Sbjct: 715 Q 715
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 556 LHLLWLVFESH*STRERDNCILHSFAKIS 470
++ LWL F + S+ D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_43628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -3
Query: 528 VIEVRGNVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLI 379
VI + GN +T + + R V +FV ++ L+ G VLS P+ T++
Sbjct: 36 VIVLFGNSLTLYIVLSNRRLRTVPNLFVVSLALSDLGMGVLSMPMCITVL 85
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 468 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGXPPSLTTSKGQCFMSACTVASSNLRPMR 289
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 288 RLASNIVL 265
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_12344| Best HMM Match : ATP-synt_B (HMM E-Value=1.9)
Length = 341
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/101 (23%), Positives = 41/101 (40%)
Frame = +2
Query: 236 RQEPGGVNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGXPKIKVAYKGEDKTF 415
R+ G V+ + T + +IG F QAD+ + + K+++ F
Sbjct: 53 RKSTGKVDNSKTYTAGRYMIGPDFTFKKYQADLHFVQLDTFAVFTSGKLELL-----SVF 107
Query: 416 FPEEVSSMVLTKMKETAEAYLGKTVQNAVITFPRTSMTLKD 538
P +V S L+++ ETA VQ + T +KD
Sbjct: 108 IPNDVKSRYLSQVIETANEERETFVQREKLVRKETEKLIKD 148
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 21 HVC*VVLRTSNKTD*KYKMAKXPAVGIDL 107
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 137 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGGVN 259
P R DH R ++ RH A +R +EPGGV+
Sbjct: 942 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVH 982
>SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 LKIQNGKXTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 238
L++ N + ++ R GY L R C R + +R + H++L R +RC
Sbjct: 661 LRLVNTRDDKTHGKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTDTETRFCEKRCA 718
Query: 239 QEPGGVNPNNTIFDA 283
G++P N F+A
Sbjct: 719 GTASGMDPKNIPFNA 733
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 137 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGGVN 259
P R DH R ++ RH A +R +EPGGV+
Sbjct: 75 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVH 115
>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 202 RSQTPSVSSEMPPRTRWREPQQHNIRCQTSHRT*VRRCYCAS 327
R+ P S+ PP RW+ P Q QT H R Y S
Sbjct: 37 RTAEPLSHSKRPPPRRWKAPLQRCRMSQTQHGYRQGRAYTFS 78
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 103 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 246
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 103 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 246
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,479,265
Number of Sequences: 59808
Number of extensions: 511525
Number of successful extensions: 1518
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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