Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00431
         (371 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2QW62 Cluster: Putative uncharacterized protein; n=1; ...    33   1.7  
UniRef50_A0BTU3 Cluster: Chromosome undetermined scaffold_128, w...    32   2.9  
UniRef50_A0J5N4 Cluster: Diguanylate cyclase; n=1; Shewanella wo...    32   3.8  
UniRef50_Q4FNE8 Cluster: DedA family protein; n=2; Candidatus Pe...    31   5.0  
UniRef50_Q6LF85 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q5DEH9 Cluster: SJCHGC06898 protein; n=1; Schistosoma j...    31   8.8  

>UniRef50_Q2QW62 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 235

 Score = 33.1 bits (72), Expect = 1.7
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -3

Query: 339 PSSQSRHLLALQSSGHSCCLIMFSSSPWVIQFFQELLRHAXLHKVHAR 196
           PSS+S+     + +GH+C L++   S  + QF     RH   H+ H R
Sbjct: 42  PSSKSQLQRQRRRNGHACALLILLCSESITQFASFSTRHELGHQKHGR 89


>UniRef50_A0BTU3 Cluster: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 732

 Score = 32.3 bits (70), Expect = 2.9
 Identities = 15/25 (60%), Positives = 21/25 (84%)
 Frame = -1

Query: 188 LTLGVFSSSIVPMSLYYLLFKYNLL 114
           + LGVFSS ++ +SL+YL+ KYNLL
Sbjct: 579 IPLGVFSS-LIGLSLFYLIDKYNLL 602


>UniRef50_A0J5N4 Cluster: Diguanylate cyclase; n=1; Shewanella
           woodyi ATCC 51908|Rep: Diguanylate cyclase - Shewanella
           woodyi ATCC 51908
          Length = 400

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = -1

Query: 227 ATXLCTKCMHDIRLTLGVFSSSIVPMSLYYLLFKYNLLAS*SFFFI 90
           A+ L   C++   + + +F  S++P   YY+LF +++L    F+F+
Sbjct: 144 ASVLFLLCIYLASIAVAIFQYSVIPT--YYILFNFSMLIPVMFYFV 187


>UniRef50_Q4FNE8 Cluster: DedA family protein; n=2; Candidatus
           Pelagibacter ubique|Rep: DedA family protein -
           Pelagibacter ubique
          Length = 239

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -1

Query: 194 IRLTLGVFSSSIVPMSLYYLLFKYNLLAS*SFFFIKLNK 78
           +++TLG+F   +V   LY+ L K+ L    S+ FIK N+
Sbjct: 7   VKITLGLFYLLVVSSFLYFFLSKFTLEELTSYEFIKNNR 45


>UniRef50_Q6LF85 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2027

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
 Frame = +1

Query: 43   VKYYLRNC*LQNLFNLIKKKLHEANKLYLKSK*YNDIGTMEEENTPNV--SLISCMHFVQ 216
            + Y L+N    N+FN++ KK    N L +KS  Y+ +  +E  N  ++  + +  +    
Sbjct: 1624 ISYILKNIKNPNMFNMLFKKKSNNNLLDIKSNYYDYMKEIEIANNKHLEKAYVELLFREY 1683

Query: 217  XXVAKQFLKKLNYPRGTREHNQTAAM 294
              +  + L K++  RG+ + + + +M
Sbjct: 1684 MKINNKDLSKIDSSRGSIKKSSSNSM 1709


>UniRef50_Q5DEH9 Cluster: SJCHGC06898 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06898 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 116

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 336 SSQSRHLLAL-QSSGHSCCLIMFSSSPWVIQFFQELLRH 223
           S + + ++AL + S  SC LI FS   ++++ F+EL  H
Sbjct: 63  SDEEKSVIALIKKSDWSCALISFSRFKYILKIFEELREH 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,688,482
Number of Sequences: 1657284
Number of extensions: 5787710
Number of successful extensions: 11969
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11966
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)