Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00431
         (371 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.062
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   3.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.062
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 175 YFLPPLYLCRCIIYFLS--IIY*LHEVFFL 92
           YF+ PL+   CI YF    II+ +H +F L
Sbjct: 135 YFVVPLFFLLCIYYFYCAFIIFTVHLLFLL 164


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -2

Query: 166  PPLYLCRCIIYFLSIIY*LHEVFFLLN*TNFEVNNFSNNILHVLE 32
            PPL     +I    +IY   + +F  N  + ++   S  ILH L+
Sbjct: 1124 PPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITAASETILHGLK 1168



 Score = 19.8 bits (39), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 97   KKLHEANKLYLKSK*YNDIGTMEEENTPN 183
            +KL    +  + +K YN IGT +  +T N
Sbjct: 1455 EKLLCGTRYQVYAKAYNSIGTGDPSDTLN 1483


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 21  DALHSKTCKILFEKLLTSKFV 83
           + +HSK CK+    L+  K V
Sbjct: 429 NTIHSKLCKLYATFLIALKLV 449


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -3

Query: 183 IRCIFFLHC 157
           +RC+  LHC
Sbjct: 327 VRCVLSLHC 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,805
Number of Sequences: 336
Number of extensions: 1725
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)