Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00431
         (371 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g11230.1 68418.m01312 phosphate translocator-related low simi...    26   7.0  
At2g25520.1 68415.m03055 phosphate translocator-related low simi...    26   9.2  

>At5g11230.1 68418.m01312 phosphate translocator-related low
           similarity to phosphoenolpyruvate/phosphate translocator
           precursor [Mesembryanthemum crystallinum] GI:9295275,
           SP|P52178 Triose phosphate/phosphate translocator,
           non-green plastid, chloroplast precursor (CTPT)
           {Brassica oleracea}
          Length = 351

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 288 CCLIMFSSSPWVIQFFQELLRHAXLHKVHARYKANIRCIFFLH 160
           CCL  F   PW+   F  L   +  H  +A + AN  C F L+
Sbjct: 208 CCLA-FLFIPWIYVEFPVLRDTSSFHLDYAIFGANSFCAFALN 249


>At2g25520.1 68415.m03055 phosphate translocator-related low
           similarity to SP|P52178 Triose phosphate/phosphate
           translocator, non-green plastid, chloroplast precursor
           (CTPT) {Brassica oleracea},
           phosphoenolpyruvate/phosphate translocator precursor
           [Mesembryanthemum crystallinum] GI:9295275
          Length = 347

 Score = 25.8 bits (54), Expect = 9.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 288 CCLIMFSSSPWVIQFFQELLRHAXLHKVHARYKANIRCIFFLH 160
           CCL+ F S PW+   F  L   +  H     +  N  C F L+
Sbjct: 208 CCLV-FLSVPWIFVEFPVLRDTSSFHFDFVIFGTNSVCAFALN 249


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,408,836
Number of Sequences: 28952
Number of extensions: 132742
Number of successful extensions: 293
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 497853200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)