Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00430
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 2.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 3.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 7.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 7.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 7.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 7.1
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 21 9.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.4
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 21 9.4
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 419 KRAIHFCYLYFFSWITP 369
K AI C+LY SW TP
Sbjct: 274 KAAITICFLYVLSW-TP 289
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 459 VDEGDMIQFINLEKTGN 409
++E D + +N+EK+GN
Sbjct: 189 IEEHDTVLVVNIEKSGN 205
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = +2
Query: 374 LSTKKSTSNKNVLPVFSKLINCIISPSSTHGHPSNYGG*RYKGES 508
+S+K + + N++ + +L+ + S SS H + G+S
Sbjct: 357 VSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQS 401
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 459 VDEGDMIQFINLEKTGN 409
+ E D + +N+EK+GN
Sbjct: 189 IKEHDTVLVVNIEKSGN 205
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 459 VDEGDMIQFINLEKTGN 409
+ E D + +N+EK+GN
Sbjct: 189 IKEHDTVLVVNIEKSGN 205
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 459 VDEGDMIQFINLEKTGN 409
+ E D + +N+EK+GN
Sbjct: 189 IKEHDTVLVVNIEKSGN 205
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 459 VDEGDMIQFINLEKTGN 409
+ E D + +N+EK+GN
Sbjct: 194 IKEHDTVLVVNIEKSGN 210
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 459 VDEGDMIQFINLEKTGN 409
+ E D + +N+EK+GN
Sbjct: 189 IKEHDTVLVVNIEKSGN 205
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 459 VDEGDMIQFINLEKTGN 409
+ E D + +N+EK+GN
Sbjct: 189 IKEHDTVLVVNIEKSGN 205
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +3
Query: 360 HVRRSYPRKKVQVTKMYCPFS 422
H++R+YP++ ++ + Y S
Sbjct: 97 HIQRTYPKEWSKIVQQYAGVS 117
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 497 YISTLHNWMDDHELMKGI*YNL 432
YIS + N+ +D+ K + YN+
Sbjct: 89 YISNISNYNNDNNYNKKLYYNI 110
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +3
Query: 360 HVRRSYPRKKVQVTKMYCPFS 422
H++R+YP++ ++ + Y S
Sbjct: 97 HIQRTYPKEWSKIVQQYAGVS 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,308
Number of Sequences: 438
Number of extensions: 4917
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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