Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00429
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    29   0.043
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.7  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 29.1 bits (62), Expect = 0.043
 Identities = 26/89 (29%), Positives = 39/89 (43%)
 Frame = +1

Query: 289 MFENILSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLL 468
           + E+  S LN      KCEN    +    + Q +Y    + ++ V  L      LLPV  
Sbjct: 156 LLEHCFSMLNYVYSS-KCENNSTGVEHFFKKQFHYIFTYMPYNIVFGLCLTTFGLLPVNG 214

Query: 469 KLREFCKLNICTIW*RI*YSKILISNSVY 555
              E C L       ++ YSKI+IS S++
Sbjct: 215 VTSEKCNLTFSWYSKKVFYSKIIISGSIF 243


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 411 YNYYWFIIILKPVQTVYKIH*IFTFHVLVFI 319
           Y +Y+  IIL  V   Y    IFT H+L  +
Sbjct: 101 YYFYYAFIILLCVYYFYYAFIIFTVHLLFLL 131



 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 420 SIEYNYYWFIIILKPVQTVYKIH*IFTFHVLVFI 319
           +I   +Y  +IIL  +   Y    +FT H+L+ +
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLV 256


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 716 EVCK*LWFFN*FCCFIFYVKMVQQ 645
           E+ + L+FF+ FCC +F++ +  Q
Sbjct: 5   ELKRVLFFFS-FCCILFFIYLYWQ 27


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 101 VCRENQLNDLFNLFGDDNEPLPC 169
           +C+E     L N+  DD  P PC
Sbjct: 93  ICKEGWEGALCNINTDDCSPNPC 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,819
Number of Sequences: 336
Number of extensions: 3605
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)