Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00429
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U92538-1|AAC51933.1| 435|Homo sapiens origin recognition comple... 57 8e-08
BC023652-1|AAH23652.1| 435|Homo sapiens origin recognition comp... 57 8e-08
AF081459-1|AAC64401.1| 324|Homo sapiens origin recognition comp... 57 8e-08
AF049127-1|AAC63972.1| 435|Homo sapiens origin recognition comp... 57 8e-08
AF047599-1|AAC80283.1| 435|Homo sapiens origin recognition comp... 57 8e-08
AC007393-1|AAF19238.1| 383|Homo sapiens unknown protein. 57 8e-08
AK223361-1|BAD97081.1| 435|Homo sapiens origin recognition comp... 55 3e-07
U34249-1|AAD03787.1| 465|Homo sapiens zinc finger protein protein. 31 6.4
BX248419-8|CAM26028.1| 465|Homo sapiens tripartite motif-contai... 31 6.4
BX005441-6|CAM26239.1| 465|Homo sapiens tripartite motif-contai... 31 6.4
BC041094-1|AAH41094.1| 325|Homo sapiens TAF5L protein protein. 31 6.4
BC038585-1|AAH38585.1| 465|Homo sapiens tripartite motif-contai... 31 6.4
BA000025-87|BAB63331.1| 465|Homo sapiens ZNFB7 protein. 31 6.4
AL845450-4|CAI17703.1| 465|Homo sapiens tripartite motif-contai... 31 6.4
AL844220-3|CAI18611.1| 465|Homo sapiens tripartite motif-contai... 31 6.4
AL671859-12|CAI17588.1| 465|Homo sapiens tripartite motif-conta... 31 6.4
AL671855-8|CAI18237.1| 465|Homo sapiens tripartite motif-contai... 31 6.4
AL669914-12|CAI18189.1| 465|Homo sapiens tripartite motif-conta... 31 6.4
AL121990-8|CAI22016.1| 325|Homo sapiens TAF5-like RNA polymeras... 31 6.4
AL121990-7|CAI22015.1| 589|Homo sapiens TAF5-like RNA polymeras... 31 6.4
AF220132-1|AAG53505.1| 465|Homo sapiens tripartite motif protei... 31 6.4
AF069736-1|AAC39906.1| 589|Homo sapiens PCAF associated factor ... 31 6.4
AB202085-2|BAE78606.1| 465|Homo sapiens tripartite motif-contai... 31 6.4
AB103595-2|BAF31257.1| 465|Homo sapiens Zn-finger protein protein. 31 6.4
AB088089-2|BAC54922.1| 465|Homo sapiens tripartite motif-contai... 31 6.4
>U92538-1|AAC51933.1| 435|Homo sapiens origin recognition complex
subunit 5 homolog protein.
Length = 435
Score = 56.8 bits (131), Expect = 8e-08
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Frame = +1
Query: 256 VDCIECYSSKIMFENILSALN--DENED-----VKCENLMDFINCLNRLQN----NYEPI 402
V+C+EC++ +++ E IL+ LN +ED + CE DF+ ++ + +
Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120
Query: 403 VIVFDRVERLRNMDQNLLPVLLKLREFCKLNICTIW 510
IV D+ E LR+M+ NLLP L+L+E N+ ++
Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLF 156
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2
Query: 77 MDEIYSKVVCRENQLNDLFNLFGDDNEPLPCSIFISGSMATGKTLCLQTVLNYLSYKHV 253
M + + V+CRE+Q++ L +LFG+ + SIFI G A+GKT QT+L L HV
Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHV 59
>BC023652-1|AAH23652.1| 435|Homo sapiens origin recognition
complex, subunit 5-like (yeast) protein.
Length = 435
Score = 56.8 bits (131), Expect = 8e-08
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Frame = +1
Query: 256 VDCIECYSSKIMFENILSALN--DENED-----VKCENLMDFINCLNRLQN----NYEPI 402
V+C+EC++ +++ E IL+ LN +ED + CE DF+ ++ + +
Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120
Query: 403 VIVFDRVERLRNMDQNLLPVLLKLREFCKLNICTIW 510
IV D+ E LR+M+ NLLP L+L+E N+ ++
Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLF 156
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2
Query: 77 MDEIYSKVVCRENQLNDLFNLFGDDNEPLPCSIFISGSMATGKTLCLQTVLNYLSYKHV 253
M + + V+CRE+Q++ L +LFG+ + SIFI G A+GKT QT+L L HV
Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHV 59
>AF081459-1|AAC64401.1| 324|Homo sapiens origin recognition complex
subunit ORC5T protein.
Length = 324
Score = 56.8 bits (131), Expect = 8e-08
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Frame = +1
Query: 256 VDCIECYSSKIMFENILSALN--DENED-----VKCENLMDFINCLNRLQN----NYEPI 402
V+C+EC++ +++ E IL+ LN +ED + CE DF+ ++ + +
Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120
Query: 403 VIVFDRVERLRNMDQNLLPVLLKLREFCKLNICTIW 510
IV D+ E LR+M+ NLLP L+L+E N+ ++
Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLF 156
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +2
Query: 77 MDEIYSKVVCRENQLNDLFNLFGDDNEPLPCSIFISGSMATGKTLCLQTVLNYLSYKHV 253
M + + V+CRE+Q++ L +LFG+ + SIFI A+GKT QT+L L HV
Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYRHTASGKTYVTQTLLKTLELPHV 59
>AF049127-1|AAC63972.1| 435|Homo sapiens origin recognition complex
subunit 5 protein.
Length = 435
Score = 56.8 bits (131), Expect = 8e-08
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Frame = +1
Query: 256 VDCIECYSSKIMFENILSALN--DENED-----VKCENLMDFINCLNRLQN----NYEPI 402
V+C+EC++ +++ E IL+ LN +ED + CE DF+ ++ + +
Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120
Query: 403 VIVFDRVERLRNMDQNLLPVLLKLREFCKLNICTIW 510
IV D+ E LR+M+ NLLP L+L+E N+ ++
Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLF 156
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +2
Query: 77 MDEIYSKVVCRENQLNDLFNLFGDDNEPLPCSIFISGSMATGKTLCLQTVLNYLSYKHV 253
M + + V+CRE+Q++ L +LFG+ + SIFI A+GKT QT+L L HV
Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYRHTASGKTYVTQTLLKTLELPHV 59
>AF047599-1|AAC80283.1| 435|Homo sapiens origin recognition complex
subunit 5 protein.
Length = 435
Score = 56.8 bits (131), Expect = 8e-08
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Frame = +1
Query: 256 VDCIECYSSKIMFENILSALN--DENED-----VKCENLMDFINCLNRLQN----NYEPI 402
V+C+EC++ +++ E IL+ LN +ED + CE DF+ ++ + +
Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120
Query: 403 VIVFDRVERLRNMDQNLLPVLLKLREFCKLNICTIW 510
IV D+ E LR+M+ NLLP L+L+E N+ ++
Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLF 156
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2
Query: 77 MDEIYSKVVCRENQLNDLFNLFGDDNEPLPCSIFISGSMATGKTLCLQTVLNYLSYKHV 253
M + + V+CRE+Q++ L +LFG+ + SIFI G A+GKT QT+L L HV
Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHV 59
>AC007393-1|AAF19238.1| 383|Homo sapiens unknown protein.
Length = 383
Score = 56.8 bits (131), Expect = 8e-08
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Frame = +1
Query: 256 VDCIECYSSKIMFENILSALN--DENED-----VKCENLMDFINCLNRLQN----NYEPI 402
V+C+EC++ +++ E IL+ LN +ED + CE DF+ ++ + +
Sbjct: 61 VNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120
Query: 403 VIVFDRVERLRNMDQNLLPVLLKLREFCKLNICTIW 510
IV D+ E LR+M+ NLLP L+L+E N+ ++
Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLF 156
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2
Query: 77 MDEIYSKVVCRENQLNDLFNLFGDDNEPLPCSIFISGSMATGKTLCLQTVLNYLSYKHV 253
M + + V+CRE+Q++ L +LFG+ + SIFI G A+GKT QT+L L HV
Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHV 59
>AK223361-1|BAD97081.1| 435|Homo sapiens origin recognition complex
subunit 5 isoform 1 variant protein.
Length = 435
Score = 54.8 bits (126), Expect = 3e-07
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Frame = +1
Query: 256 VDCIECYSSKIMFENILSALN--DENED-----VKCENLMDFINCLNRLQN----NYEPI 402
V+C+EC++ +++ E IL+ L+ +ED + CE DF+ ++ + +
Sbjct: 61 VNCVECFTLRLLLEQILNKLDHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTV 120
Query: 403 VIVFDRVERLRNMDQNLLPVLLKLREFCKLNICTIW 510
IV D+ E LR+M+ NLLP L+L+E N+ ++
Sbjct: 121 YIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLF 156
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2
Query: 77 MDEIYSKVVCRENQLNDLFNLFGDDNEPLPCSIFISGSMATGKTLCLQTVLNYLSYKHV 253
M + + V+CRE+Q++ L +LFG+ + SIFI G A+GKT QT+L L HV
Sbjct: 1 MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHV 59
>U34249-1|AAD03787.1| 465|Homo sapiens zinc finger protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>BX248419-8|CAM26028.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>BX005441-6|CAM26239.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>BC041094-1|AAH41094.1| 325|Homo sapiens TAF5L protein protein.
Length = 325
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 84 KYIVKLCAERIS*TICSIYSEMTTNHCRVLFL*VEV-WQPAKRYAYKLFS 230
KY+V+L + + I + S+ T C+VL L + + QPAKR Y+L++
Sbjct: 162 KYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDYQLYA 211
>BC038585-1|AAH38585.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>BA000025-87|BAB63331.1| 465|Homo sapiens ZNFB7 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>AL845450-4|CAI17703.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>AL844220-3|CAI18611.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>AL671859-12|CAI17588.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>AL671855-8|CAI18237.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>AL669914-12|CAI18189.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>AL121990-8|CAI22016.1| 325|Homo sapiens TAF5-like RNA polymerase
II, p300/CBP-associated factor (PCAF)-associated facto
protein.
Length = 325
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 84 KYIVKLCAERIS*TICSIYSEMTTNHCRVLFL*VEV-WQPAKRYAYKLFS 230
KY+V+L + + I + S+ T C+VL L + + QPAKR Y+L++
Sbjct: 162 KYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDYQLYA 211
>AL121990-7|CAI22015.1| 589|Homo sapiens TAF5-like RNA polymerase
II, p300/CBP-associated factor (PCAF)-associated facto
protein.
Length = 589
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 84 KYIVKLCAERIS*TICSIYSEMTTNHCRVLFL*VEV-WQPAKRYAYKLFS 230
KY+V+L + + I + S+ T C+VL L + + QPAKR Y+L++
Sbjct: 162 KYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDYQLYA 211
>AF220132-1|AAG53505.1| 465|Homo sapiens tripartite motif protein
TRIM15 alpha protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>AF069736-1|AAC39906.1| 589|Homo sapiens PCAF associated factor 65
beta protein.
Length = 589
Score = 30.7 bits (66), Expect = 6.4
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 84 KYIVKLCAERIS*TICSIYSEMTTNHCRVLFL*VEV-WQPAKRYAYKLFS 230
KY+V+L + + I + S+ T C+VL L + + QPAKR Y+L++
Sbjct: 162 KYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDYQLYA 211
>AB202085-2|BAE78606.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>AB103595-2|BAF31257.1| 465|Homo sapiens Zn-finger protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
>AB088089-2|BAC54922.1| 465|Homo sapiens tripartite
motif-containing 15 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 304 LSALNDENEDVKCENLMDFINCLNRLQNNYEPIVIVFDRVERLRNMDQNLLPVLLKLRE 480
LS DE EDVKC+ L ++++ + F+R++ + ++Q +L +LRE
Sbjct: 137 LSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ--QELEQQRCLLLARLRE 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,847,079
Number of Sequences: 237096
Number of extensions: 1781988
Number of successful extensions: 2953
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2953
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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