Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00427
         (744 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023637-1|AAY85037.1|  172|Drosophila melanogaster IP05651p pro...    72   1e-12
AE014298-3073|AAF50865.1|  131|Drosophila melanogaster CG15449-P...    72   1e-12
AE014298-1261|AAF46435.2|  125|Drosophila melanogaster CG7267-PB...    44   3e-04

>BT023637-1|AAY85037.1|  172|Drosophila melanogaster IP05651p
           protein.
          Length = 172

 Score = 71.7 bits (168), Expect = 1e-12
 Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
 Frame = +2

Query: 74  RLSIIKFLELALTCSCVALHYHSYNADADI--GMLVTGTFVGYLIIFAGAAAGYIMQTPS 247
           RL+++KFLEL    +C+ LH++S+N D DI    L TGTF GY+I+  G  AG +M+ P 
Sbjct: 50  RLNVVKFLELGFAVACLVLHFYSFN-DRDIMTSFLATGTFTGYIIVVIGVFAGVLMRAPI 108

Query: 248 HKRSTSSIRWSVLPCS 295
           HKR    I +SVL C+
Sbjct: 109 HKR--IDIFFSVLGCT 122



 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 28/59 (47%), Positives = 40/59 (67%)
 Frame = +1

Query: 256 IDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAVLTQR 432
           IDIF+S++G  LFVASG  II+ ++   ++  +D  L KASL+I+NG +   DAV T R
Sbjct: 112 IDIFFSVLGCTLFVASGVFIIEAWEFSFRTRTRDLALIKASLSIVNGVLFGFDAVFTFR 170


>AE014298-3073|AAF50865.1|  131|Drosophila melanogaster CG15449-PA
           protein.
          Length = 131

 Score = 71.7 bits (168), Expect = 1e-12
 Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
 Frame = +2

Query: 74  RLSIIKFLELALTCSCVALHYHSYNADADI--GMLVTGTFVGYLIIFAGAAAGYIMQTPS 247
           RL+++KFLEL    +C+ LH++S+N D DI    L TGTF GY+I+  G  AG +M+ P 
Sbjct: 9   RLNVVKFLELGFAVACLVLHFYSFN-DRDIMTSFLATGTFTGYIIVVIGVFAGVLMRAPI 67

Query: 248 HKRSTSSIRWSVLPCS 295
           HKR    I +SVL C+
Sbjct: 68  HKR--IDIFFSVLGCT 81



 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 28/59 (47%), Positives = 40/59 (67%)
 Frame = +1

Query: 256 IDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAVLTQR 432
           IDIF+S++G  LFVASG  II+ ++   ++  +D  L KASL+I+NG +   DAV T R
Sbjct: 71  IDIFFSVLGCTLFVASGVFIIEAWEFSFRTRTRDLALIKASLSIVNGVLFGFDAVFTFR 129


>AE014298-1261|AAF46435.2|  125|Drosophila melanogaster CG7267-PB
           protein.
          Length = 125

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = +1

Query: 256 IDIFYSLVGVALFVASGAIIIDRFQHYG--KSEIKDKNLAKASLAIINGAILLVDAV 420
           ++  +SL+G  LFVASGA++ID + H G   ++ K + +   SL IIN A+ L+D +
Sbjct: 65  LNALFSLIGCLLFVASGALVIDEW-HGGLLNTDRKRQAIGAGSLMIINAAVFLLDTL 120



 Score = 32.3 bits (70), Expect = 0.72
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +2

Query: 62  MAISRLSIIKFLELALTCSCVALHYHSYNADADIGMLVTGTFVGYLIIFAGAAAGYIMQT 241
           M  +   ++K +ELA+  +C+ L+    N      ++V GT  GY +I      G+++ +
Sbjct: 1   MEFNNRLLLKIIELAIAIACIVLYETVGNLSLH-PVIVAGTVGGYTVICGVLLIGHVLNS 59

Query: 242 PSHKR 256
              KR
Sbjct: 60  LVEKR 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,272,992
Number of Sequences: 53049
Number of extensions: 683766
Number of successful extensions: 2092
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2090
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)