Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00426
         (747 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB001601-1|BAA25908.1| 1041|Homo sapiens ATP-dependent RNA helic...    31   5.8  
D42073-1|BAA07670.1|  331|Homo sapiens reticulocalbin protein.         30   7.7  
BC010120-1|AAH10120.1|  331|Homo sapiens reticulocalbin 1, EF-ha...    30   7.7  
AY423728-1|AAS00491.1|  165|Homo sapiens proliferation-inducing ...    30   7.7  

>AB001601-1|BAA25908.1| 1041|Homo sapiens ATP-dependent RNA helicase
           #3 protein.
          Length = 1041

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -2

Query: 491 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 318
           +L+VLP    LP+D   R+      G   +V    +   S T+  +++ L+  FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSPTIEGIIYVLDPGFCKQKS 699


>D42073-1|BAA07670.1|  331|Homo sapiens reticulocalbin protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +1

Query: 94  DSKLE-DDLYNSILVADYDHSVEKSKQ-IYEDKKSEVITNVVNKLIRNNKMNCME*PTSY 267
           D KL+ D++ + IL  DYDH+  +++  +YE  K++       +++ N  M      T+Y
Sbjct: 261 DGKLDKDEIRHWILPQDYDHAQAEARHLVYESDKNKDEKLTKEEILENWNMFVGSQATNY 320

Query: 268 GSKAPK 285
           G    K
Sbjct: 321 GEDLTK 326


>BC010120-1|AAH10120.1|  331|Homo sapiens reticulocalbin 1, EF-hand
           calcium binding domain protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +1

Query: 94  DSKLE-DDLYNSILVADYDHSVEKSKQ-IYEDKKSEVITNVVNKLIRNNKMNCME*PTSY 267
           D KL+ D++ + IL  DYDH+  +++  +YE  K++       +++ N  M      T+Y
Sbjct: 261 DGKLDKDEIRHWILPQDYDHAQAEARHLVYESDKNKDEKLTKEEILENWNMFVGSQATNY 320

Query: 268 GSKAPK 285
           G    K
Sbjct: 321 GEDLTK 326


>AY423728-1|AAS00491.1|  165|Homo sapiens proliferation-inducing
           gene 20 protein protein.
          Length = 165

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +1

Query: 94  DSKLE-DDLYNSILVADYDHSVEKSKQ-IYEDKKSEVITNVVNKLIRNNKMNCME*PTSY 267
           D KL+ D++ + IL  DYDH+  +++  +YE  K++       +++ N  M      T+Y
Sbjct: 95  DGKLDKDEIRHWILPQDYDHAQAEARHLVYESDKNKDEKLTKEEILENWNMFVGSQATNY 154

Query: 268 GSKAPK 285
           G    K
Sbjct: 155 GEDLTK 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,325,887
Number of Sequences: 237096
Number of extensions: 1895575
Number of successful extensions: 5352
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5351
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)