Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00418
         (759 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012179-1|AAH12179.1|  184|Homo sapiens glucosamine-phosphate N...    38   0.030
AK090577-1|BAC03482.1|  184|Homo sapiens protein ( Homo sapiens ...    38   0.030

>BC012179-1|AAH12179.1|  184|Homo sapiens glucosamine-phosphate
           N-acetyltransferase 1 protein.
          Length = 184

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = +1

Query: 13  TVSLLAQELGCYKMSLDCKDKLIKFYETLGYKMEPGN 123
           T++LL+++L CYK++L+C  + + FY+  GY +   N
Sbjct: 140 TLTLLSKKLNCYKITLECLPQNVGFYKKFGYTVSEEN 176


>AK090577-1|BAC03482.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33258 fis, clone ASTRO2005687, highly similar to
           Mus musculus mRNA for EMeg32 protein. ).
          Length = 184

 Score = 38.3 bits (85), Expect = 0.030
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = +1

Query: 13  TVSLLAQELGCYKMSLDCKDKLIKFYETLGYKMEPGN 123
           T++LL+++L CYK++L+C  + + FY+  GY +   N
Sbjct: 140 TLTLLSKKLNCYKITLECLPQNVGFYKKFGYTVSEEN 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,121,419
Number of Sequences: 237096
Number of extensions: 1870185
Number of successful extensions: 2593
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2593
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)