Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00416
         (777 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050537-1|AAH50537.2|  463|Homo sapiens FLJ20160 protein protein.     34   0.50 
AK127176-1|BAC86869.1|  791|Homo sapiens protein ( Homo sapiens ...    34   0.50 
AK000167-1|BAA90987.1|  463|Homo sapiens protein ( Homo sapiens ...    34   0.50 
AC093388-1|AAY24173.1|  463|Homo sapiens unknown protein.              34   0.50 
AF174031-1|AAD53777.1|  140|Homo sapiens immunoglobulin heavy ch...    31   4.6  
AF174009-1|AAD53756.1|  140|Homo sapiens immunoglobulin heavy ch...    31   4.6  

>BC050537-1|AAH50537.2|  463|Homo sapiens FLJ20160 protein protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +3

Query: 510 LPWTVEEMNGTYTEVGLTLTAGALPAVPALWWAEALVDYIGHSNVFILAFTFYGLRY 680
           L W +E++NGT T  G+      +  + A +++  L++ IGH  V  +       RY
Sbjct: 140 LYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARY 196


>AK127176-1|BAC86869.1|  791|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45241 fis, clone BRCOC2006164. ).
          Length = 791

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +3

Query: 510 LPWTVEEMNGTYTEVGLTLTAGALPAVPALWWAEALVDYIGHSNVFILAFTFYGLRY 680
           L W +E++NGT T  G+      +  + A +++  L++ IGH  V  +       RY
Sbjct: 468 LYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARY 524


>AK000167-1|BAA90987.1|  463|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20160 fis, clone COL09072. ).
          Length = 463

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +3

Query: 510 LPWTVEEMNGTYTEVGLTLTAGALPAVPALWWAEALVDYIGHSNVFILAFTFYGLRY 680
           L W +E++NGT T  G+      +  + A +++  L++ IGH  V  +       RY
Sbjct: 140 LYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARY 196


>AC093388-1|AAY24173.1|  463|Homo sapiens unknown protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +3

Query: 510 LPWTVEEMNGTYTEVGLTLTAGALPAVPALWWAEALVDYIGHSNVFILAFTFYGLRY 680
           L W +E++NGT T  G+      +  + A +++  L++ IGH  V  +       RY
Sbjct: 140 LYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARY 196


>AF174031-1|AAD53777.1|  140|Homo sapiens immunoglobulin heavy chain
           variable region precursor protein.
          Length = 140

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 518 PRKNASMPLHRMPSRATTTKTAAVSAPYRRTTFMGRANTPVAVCHHHS 375
           P+  A+   HR   R + T+  ++S  Y   T +   +T V  C  HS
Sbjct: 72  PKNGATSYSHRFQGRVSMTRDTSISTTYMELTTLQSDDTAVYFCGSHS 119


>AF174009-1|AAD53756.1|  140|Homo sapiens immunoglobulin heavy chain
           variable region precursor protein.
          Length = 140

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 518 PRKNASMPLHRMPSRATTTKTAAVSAPYRRTTFMGRANTPVAVCHHHS 375
           P+  A+   HR   R + T+  ++S  Y   T +   +T V  C  HS
Sbjct: 72  PKNGATSYSHRFQGRVSMTRDTSISTTYMELTTLQSDDTAVYFCGSHS 119


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,982,776
Number of Sequences: 237096
Number of extensions: 3045008
Number of successful extensions: 6686
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6686
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)