Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00415
         (762 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20979-1|AAA76736.1|  938|Homo sapiens chromatin assembly factor...    72   3e-12
BC067093-1|AAH67093.1|  956|Homo sapiens chromatin assembly fact...    72   3e-12
AF190465-2|AAF04291.1|  938|Homo sapiens chromatin assembly fact...    72   3e-12
BC115026-1|AAI15027.1| 1339|Homo sapiens claspin homolog (Xenopu...    31   3.4  
BC115025-1|AAI15026.1| 1275|Homo sapiens CLSPN protein protein.        31   3.4  
BC113116-1|AAI13117.1| 1339|Homo sapiens claspin protein.              31   3.4  
AL354864-2|CAH73807.1| 1331|Homo sapiens claspin homolog (Xenopu...    31   3.4  
AF297866-1|AAG24515.1| 1332|Homo sapiens Hu-Claspin protein.           31   3.4  

>U20979-1|AAA76736.1|  938|Homo sapiens chromatin assembly factor-I
           p150 subunit protein.
          Length = 938

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 33/82 (40%), Positives = 44/82 (53%)
 Frame = +3

Query: 507 NRRPPYWGTWRKKTTFVKPRKPFGQDEKQLXXXXXXXXXXXXXXXXXSIDGSAVGSDDEQ 686
           N RP YWGTW KKT  ++ R P+ QD K L                 S+  S  G DD+ 
Sbjct: 547 NHRPAYWGTWNKKTALIRARDPWAQDTKLLDYEVDSDEEWEEEEPGESLSHSE-GDDDDD 605

Query: 687 DGDEYEVDNEVFVPHGYLSDEE 752
            G++ + D+  FVPHGYLS++E
Sbjct: 606 MGEDEDEDDGFFVPHGYLSEDE 627


>BC067093-1|AAH67093.1|  956|Homo sapiens chromatin assembly factor
           1, subunit A (p150) protein.
          Length = 956

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 33/82 (40%), Positives = 44/82 (53%)
 Frame = +3

Query: 507 NRRPPYWGTWRKKTTFVKPRKPFGQDEKQLXXXXXXXXXXXXXXXXXSIDGSAVGSDDEQ 686
           N RP YWGTW KKT  ++ R P+ QD K L                 S+  S  G DD+ 
Sbjct: 565 NHRPAYWGTWNKKTALIRARDPWAQDTKLLDYEVDSDEEWEEEEPGESLSHSE-GDDDDD 623

Query: 687 DGDEYEVDNEVFVPHGYLSDEE 752
            G++ + D+  FVPHGYLS++E
Sbjct: 624 MGEDEDEDDGFFVPHGYLSEDE 645


>AF190465-2|AAF04291.1|  938|Homo sapiens chromatin assembly
           factor-I p150 subunit protein.
          Length = 938

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 33/82 (40%), Positives = 44/82 (53%)
 Frame = +3

Query: 507 NRRPPYWGTWRKKTTFVKPRKPFGQDEKQLXXXXXXXXXXXXXXXXXSIDGSAVGSDDEQ 686
           N RP YWGTW KKT  ++ R P+ QD K L                 S+  S  G DD+ 
Sbjct: 547 NHRPAYWGTWNKKTALIRARDPWAQDTKLLDYEVDSDEEWEEEEPGESLSHSE-GDDDDD 605

Query: 687 DGDEYEVDNEVFVPHGYLSDEE 752
            G++ + D+  FVPHGYLS++E
Sbjct: 606 MGEDEDEDDGFFVPHGYLSEDE 627


>BC115026-1|AAI15027.1| 1339|Homo sapiens claspin homolog (Xenopus
            laevis) protein.
          Length = 1339

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 651  IDGSAVGSDDEQDGDEYEVDNEVFVPHGYLSDEE 752
            + GS VGS+DE DG+E +   E  +     SDEE
Sbjct: 1060 VSGSDVGSEDEYDGEEIDEYEEDVIDEVLPSDEE 1093


>BC115025-1|AAI15026.1| 1275|Homo sapiens CLSPN protein protein.
          Length = 1275

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 651  IDGSAVGSDDEQDGDEYEVDNEVFVPHGYLSDEE 752
            + GS VGS+DE DG+E +   E  +     SDEE
Sbjct: 996  VSGSDVGSEDEYDGEEIDEYEEDVIDEVLPSDEE 1029


>BC113116-1|AAI13117.1| 1339|Homo sapiens claspin protein.
          Length = 1339

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 651  IDGSAVGSDDEQDGDEYEVDNEVFVPHGYLSDEE 752
            + GS VGS+DE DG+E +   E  +     SDEE
Sbjct: 1060 VSGSDVGSEDEYDGEEIDEYEEDVIDEVLPSDEE 1093


>AL354864-2|CAH73807.1| 1331|Homo sapiens claspin homolog (Xenopus
            laevis) protein.
          Length = 1331

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 651  IDGSAVGSDDEQDGDEYEVDNEVFVPHGYLSDEE 752
            + GS VGS+DE DG+E +   E  +     SDEE
Sbjct: 1059 VSGSDVGSEDEYDGEEIDEYEEDVIDEVLPSDEE 1092


>AF297866-1|AAG24515.1| 1332|Homo sapiens Hu-Claspin protein.
          Length = 1332

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 651  IDGSAVGSDDEQDGDEYEVDNEVFVPHGYLSDEE 752
            + GS VGS+DE DG+E +   E  +     SDEE
Sbjct: 1060 VSGSDVGSEDEYDGEEIDEYEEDVIDEVLPSDEE 1093


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,051,106
Number of Sequences: 237096
Number of extensions: 1526104
Number of successful extensions: 7673
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7670
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)