Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00414
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   4.1  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   4.1  
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    23   7.2  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   9.5  

>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 551 SMNVMSLRSC-VKRAASLMTAALCSTARNMDLSTLGGRFRLRSSMYNLINTFY 706
           ++ ++ + +C   ++  LM  +L S ARN  + ++     L   MYN++  +Y
Sbjct: 80  TLTMLDMHTCQTDKSVKLMERSLFS-ARNCFVESMLASGSLHQGMYNVLQEWY 131


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 551 SMNVMSLRSC-VKRAASLMTAALCSTARNMDLSTLGGRFRLRSSMYNLINTFY 706
           ++ ++ + +C   ++  LM  +L S ARN  + ++     L   MYN++  +Y
Sbjct: 80  TLTMLDMHTCQTDKSVKLMERSLFS-ARNCFVESMLASGSLHQGMYNVLQEWY 131


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 474 SRLCAVPSSSSPTSKDLRIKEVGF 545
           S +C  P    PTS  L +  VGF
Sbjct: 240 SPVCLPPDDFPPTSPGLNVTAVGF 263


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 110 RYTPTEPRFRIRFIFAVPVASCWPAP 33
           R TP+ PR        VP +S W  P
Sbjct: 48  RSTPSSPRLAQASTCPVPCSSIWSRP 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,888
Number of Sequences: 2352
Number of extensions: 17647
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)