Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00413
         (523 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17E05 Cluster: Myeloid leukemia factor, putative; n=3;...    55   9e-07
UniRef50_UPI0000D56B72 Cluster: PREDICTED: similar to Myeloid le...    53   3e-06
UniRef50_UPI0000DB7A3D Cluster: PREDICTED: similar to Myeloid le...    50   3e-05
UniRef50_Q9NKV0 Cluster: Myeloid leukemia factor; n=7; Diptera|R...    42   0.011
UniRef50_A6VRN0 Cluster: RarD protein, DMT superfamily transport...    35   0.98 
UniRef50_Q7QA97 Cluster: ENSANGP00000013027; n=6; Endopterygota|...    33   4.0  
UniRef50_UPI0000D56767 Cluster: PREDICTED: similar to CG11293-PA...    33   5.2  
UniRef50_Q9ERL9 Cluster: Guanylate cyclase soluble subunit alpha...    32   9.2  

>UniRef50_Q17E05 Cluster: Myeloid leukemia factor, putative; n=3;
           Aedes aegypti|Rep: Myeloid leukemia factor, putative -
           Aedes aegypti (Yellowfever mosquito)
          Length = 314

 Score = 55.2 bits (127), Expect = 9e-07
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
 Frame = +3

Query: 255 SLFADPFGMFGGENHM---AIMGPRHNTALMPFMPQMPSMNRLFRDMDXXXXXXXXXXXX 425
           SL A+PFGMFG  +++   ++ GPR    LMP M     MNRL  + D            
Sbjct: 32  SLIANPFGMFGALDNITGPSLAGPRGGLQLMPHMGPNMHMNRLLNNNDGTMYSSSSVFSM 91

Query: 426 XXXXXXXXPNGKPQVYSSTSSTKVGPNGLKK 518
                   P+G PQVY +TSST+ GP G+K+
Sbjct: 92  TSG-----PDG-PQVYQATSSTRAGPGGIKE 116


>UniRef50_UPI0000D56B72 Cluster: PREDICTED: similar to Myeloid
           leukemia factor (Myelodysplasia-myeloid leukemia factor)
           (dMLF); n=1; Tribolium castaneum|Rep: PREDICTED: similar
           to Myeloid leukemia factor (Myelodysplasia-myeloid
           leukemia factor) (dMLF) - Tribolium castaneum
          Length = 250

 Score = 53.2 bits (122), Expect = 3e-06
 Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
 Frame = +3

Query: 255 SLFADPFGMFGGENHMAIMGPRHNTALMPF-MPQMPSMNRLFRDMDXXXXXXXXXXXXXX 431
           S F+DPF M  G+      G R + +LMPF MP MP+ NRL                   
Sbjct: 33  SFFSDPFSMGFGDFDR---GHRMSNSLMPFSMPIMPNFNRLLSG-SLDSLGAHSYSSSTV 88

Query: 432 XXXXXXPNGKPQVYSSTSSTKVGPNGLKK 518
                 P+G+PQVY +TSST+  P G+K+
Sbjct: 89  VSMSSGPDGRPQVYKATSSTRTAPGGIKE 117



 Score = 39.9 bits (89), Expect = 0.035
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +1

Query: 160 MSLFGSLMADVEDDPFFGS 216
           MSLFGSLM D+E+DPFFGS
Sbjct: 1   MSLFGSLMGDIEEDPFFGS 19


>UniRef50_UPI0000DB7A3D Cluster: PREDICTED: similar to Myeloid
           leukemia factor (Myelodysplasia-myeloid leukemia factor)
           (dMLF); n=2; Apocrita|Rep: PREDICTED: similar to Myeloid
           leukemia factor (Myelodysplasia-myeloid leukemia factor)
           (dMLF) - Apis mellifera
          Length = 257

 Score = 50.0 bits (114), Expect = 3e-05
 Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
 Frame = +3

Query: 255 SLFADPFGMFGGENHMAIMGPRH-------NTALMPF-MPQMPSMN--RLFRDMDXXXXX 404
           SLF DPFGM G  +H AI    H       +  ++PF  P +PS N   +F + D     
Sbjct: 33  SLFNDPFGMMGHPSHNAIAHANHRNRNHQDDLQVLPFGFPPLPSFNMGNMFSNFDNMASS 92

Query: 405 XXXXXXXXXXXXXXXPNGKPQVYSSTSSTKVGPNGLKK 518
                           +G+PQVY  T+ST   P G+K+
Sbjct: 93  GNCHSFVSNSVMTFGSDGRPQVYEETTSTTTVPGGIKE 130



 Score = 35.9 bits (79), Expect = 0.56
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +1

Query: 160 MSLFGSLMADVEDDPFFGS 216
           MS FGSLM+D++DDP FGS
Sbjct: 1   MSFFGSLMSDLDDDPIFGS 19


>UniRef50_Q9NKV0 Cluster: Myeloid leukemia factor; n=7; Diptera|Rep:
           Myeloid leukemia factor - Drosophila melanogaster (Fruit
           fly)
          Length = 376

 Score = 41.5 bits (93), Expect = 0.011
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = +3

Query: 345 MPQMPSMNRLFRDMDXXXXXXXXXXXXXXXXXXXXPNGKPQVYSSTSSTKVGPNGLKK 518
           MP MP+ NRL  + D                    P+G+PQ+Y +++STK GP G+++
Sbjct: 80  MPMMPNFNRLL-NADIGGNSGASFCQSTVMTMSSGPDGRPQIYQASTSTKTGPGGVRE 136


>UniRef50_A6VRN0 Cluster: RarD protein, DMT superfamily transporter
           precursor; n=1; Marinomonas sp. MWYL1|Rep: RarD protein,
           DMT superfamily transporter precursor - Marinomonas sp.
           MWYL1
          Length = 304

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -1

Query: 520 GFFNPLGPTFVLLVELYTWGLPFGPLDITTVLLLKELPALIFPPSI 383
           GFF  +GPT + ++ ++ +G P  P  +TT +L+    A++   SI
Sbjct: 241 GFFQYIGPTGMFILAVFLYGEPLSPEKLTTFVLIWSALAMLIVDSI 286


>UniRef50_Q7QA97 Cluster: ENSANGP00000013027; n=6;
           Endopterygota|Rep: ENSANGP00000013027 - Anopheles
           gambiae str. PEST
          Length = 570

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 367 FIEGICGINGINAVLCRGPIIAMWF 293
           FI G+CGI+GI  V    P++A+WF
Sbjct: 450 FIFGVCGISGILIVFIDLPLLAIWF 474


>UniRef50_UPI0000D56767 Cluster: PREDICTED: similar to CG11293-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG11293-PA - Tribolium castaneum
          Length = 120

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 389 WWKYECRQLFQQQYRCDV-QWSER*TPGVQFYKQYKS 496
           WW   C++ FQ Q+RC   +WS    PG ++Y  + S
Sbjct: 69  WWNEVCKEEFQSQFRCKCPEWSFCRAPG-RYYNAFCS 104


>UniRef50_Q9ERL9 Cluster: Guanylate cyclase soluble subunit alpha-3;
           n=16; Coelomata|Rep: Guanylate cyclase soluble subunit
           alpha-3 - Mus musculus (Mouse)
          Length = 691

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -1

Query: 436 TTVLLLKELPALIFPPSI--SLKSRFIEGICGI-NGINAVLCRGPIIAMWFSPPNIPKGS 266
           TT  LLK+ P  +F P     L   F   I GI + ++A   +GP    WF   ++  G+
Sbjct: 621 TTYRLLKDCPGFVFTPRSREELPPNFPSDIPGICHFLDAYHHQGPNSKPWFQDKDVEDGN 680

Query: 265 AN 260
           AN
Sbjct: 681 AN 682


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,493,553
Number of Sequences: 1657284
Number of extensions: 10239201
Number of successful extensions: 22494
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22479
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)