Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00413
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 305 RHVVLTTEHPEGVREQRFIML 243
           +H+++    PEG++ Q F+M+
Sbjct: 584 QHMLIPKGTPEGMKSQLFVMI 604


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 344 KWHQCGVMPWSHNRHVVLTTEHPEGVR 264
           KW + G +P+++  +  +  E PE V+
Sbjct: 326 KWDEHGKVPYAYKGNQWVGYEDPESVQ 352


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 412 LPALIFPPSISLKSRFIEGICGING 338
           +P+  +PP  SL S  +   CG +G
Sbjct: 208 VPSTPYPPPGSLGSMGVSVPCGTSG 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,576
Number of Sequences: 336
Number of extensions: 2644
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)