Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00405
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopheri... 97 4e-19
UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9; Euteleostom... 83 4e-15
UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma j... 80 4e-14
UniRef50_O60518 Cluster: Ran-binding protein 6; n=68; Eumetazoa|... 78 2e-13
UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep: ... 57 3e-07
UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole geno... 57 4e-07
UniRef50_A6R7C2 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A4QRM7 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_O74476 Cluster: Importin beta-3 subunit; n=1; Schizosac... 51 2e-05
UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2; Ca... 51 3e-05
UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN bindin... 49 1e-04
UniRef50_Q00SR0 Cluster: Karyopherin (Importin) beta 3; n=2; Ost... 46 8e-04
UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922, ... 45 0.001
UniRef50_Q6C1P3 Cluster: Similar to sp|P32337 Saccharomyces cere... 43 0.007
UniRef50_Q22UQ4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_A7PYL2 Cluster: Chromosome chr12 scaffold_38, whole gen... 41 0.030
UniRef50_A5AVQ9 Cluster: Putative uncharacterized protein; n=2; ... 41 0.030
UniRef50_A0CES7 Cluster: Chromosome undetermined scaffold_172, w... 41 0.030
UniRef50_Q4Q561 Cluster: Putative uncharacterized protein; n=3; ... 40 0.039
UniRef50_A2FDC7 Cluster: Putative uncharacterized protein; n=1; ... 40 0.039
UniRef50_P32337 Cluster: Importin beta-3 subunit; n=10; Saccharo... 40 0.052
UniRef50_Q00WP4 Cluster: Karyopherin (Importin) beta 3; n=1; Ost... 38 0.21
UniRef50_A7PYY0 Cluster: Chromosome chr4 scaffold_39, whole geno... 36 1.1
UniRef50_A4S6V4 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 1.5
UniRef50_Q4UGM1 Cluster: Importin (Karyopherin) beta, putative; ... 35 1.5
UniRef50_A5FBC8 Cluster: TonB-dependent receptor, plug precursor... 34 2.6
UniRef50_Q54EW3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q8TI39 Cluster: Phycocyanin alpha phycocyanobilin lyase... 34 2.6
UniRef50_Q381P8 Cluster: Putative uncharacterized protein; n=3; ... 34 3.4
UniRef50_Q94LC1 Cluster: Putative uncharacterized protein OSJNBa... 33 4.5
UniRef50_A2DTC5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_A4BZR8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_A7T0R7 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.0
>UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopherin
3 CG1059-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Karyopherin 3 CG1059-PA - Apis mellifera
Length = 1040
Score = 96.7 bits (230), Expect = 4e-19
Identities = 42/78 (53%), Positives = 61/78 (78%)
Frame = +2
Query: 224 PEIAI*AADSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 403
P+I A ++EQ+LL++Q + ++ +RRKVC+V +E+ARN ID+DGNNQWPEFLQF+F
Sbjct: 93 PKIPPEAQAQLKEQILLSVQNEQTETIRRKVCEVAAEVARNLIDEDGNNQWPEFLQFLFQ 152
Query: 404 CASAQDPNIKEAGIRMFT 457
CA++ P +KE +RMFT
Sbjct: 153 CANSPVPALKENALRMFT 170
Score = 74.1 bits (174), Expect = 3e-12
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 17/85 (20%)
Frame = +3
Query: 3 ARDQAQFYQLLNTLLSTDNDIRSQAE-----------------DAYNNIPTETKVVHLVN 131
A D QF QLLNTLLSTDND R+QAE DAYNN+P ++KV L+
Sbjct: 2 AADLDQFQQLLNTLLSTDNDARTQAEVQHVANMLSEFACGHHSDAYNNLPVDSKVTFLLT 61
Query: 132 SIQNADIAEDVRQTAAVLLRRLFSA 206
S+ NA + E++R AAVLLRRLFS+
Sbjct: 62 SLCNATLTEEMRAMAAVLLRRLFSS 86
Score = 37.1 bits (82), Expect = 0.37
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 520 ISALQPNESMALRTQAVKAVGAFILLHDKEPIMQ 621
+ AL+ N QAV+A+GAFI+LHDKE +Q
Sbjct: 158 VPALKENALRMFTFQAVRAIGAFIILHDKEENIQ 191
>UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9;
Euteleostomi|Rep: RAN binding protein 5 - Homo sapiens
(Human)
Length = 126
Score = 83.4 bits (197), Expect = 4e-15
Identities = 34/79 (43%), Positives = 55/79 (69%)
Frame = +2
Query: 218 VLPEIAI*AADSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 397
V P + +++ +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 48 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 107
Query: 398 FTCASAQDPNIKEAGIRMF 454
F S+Q+ ++EA + +F
Sbjct: 108 FDSVSSQNVGLREAALHIF 126
Score = 34.3 bits (75), Expect(2) = 0.082
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3
Query: 3 ARDQAQFYQLLNTLLSTDNDIRSQAE 80
A +Q QFY LL LLS DN +R QAE
Sbjct: 3 AAEQQQFYLLLGNLLSPDNVVRKQAE 28
Score = 24.2 bits (50), Expect(2) = 0.082
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 159 DVRQTAAVLLRRLFSA 206
+ RQ AAVLLRRL S+
Sbjct: 28 EARQMAAVLLRRLLSS 43
>UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08761 protein - Schistosoma
japonicum (Blood fluke)
Length = 183
Score = 80.2 bits (189), Expect = 4e-14
Identities = 33/83 (39%), Positives = 55/83 (66%)
Frame = +2
Query: 248 DSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPN 427
+S ++QL+L + + Q +RRKV D++SEL R DDDGN++WPEF + +++ D
Sbjct: 101 NSAKQQLVLIVVHENEQLMRRKVADLISELVRMEFDDDGNSRWPEFTPILLDWSTSPDSG 160
Query: 428 IKEAGIRMFTSVPGVFGNRQTEN 496
++E +F SVP +FGN+Q ++
Sbjct: 161 LREIACHIFGSVPSLFGNQQAQS 183
>UniRef50_O60518 Cluster: Ran-binding protein 6; n=68;
Eumetazoa|Rep: Ran-binding protein 6 - Homo sapiens
(Human)
Length = 1105
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/98 (33%), Positives = 60/98 (61%)
Frame = +2
Query: 218 VLPEIAI*AADSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 397
V P + V+ +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+
Sbjct: 85 VYPNLPADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFL 144
Query: 398 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 511
+++ + E + +F PG+FG ++ +LD+IK
Sbjct: 145 IDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIK 182
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = +3
Query: 9 DQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLL 188
++ +FYQLL L++ +R QAE+ Y NIP K L+++++N +VRQ AA LL
Sbjct: 15 EKQEFYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALL 74
Query: 189 RRLFSA 206
RRL S+
Sbjct: 75 RRLLSS 80
>UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep:
Karyopherin - Aspergillus oryzae
Length = 1095
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +2
Query: 254 VREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIK 433
+R++L+ L + +R+K+ D V+E+AR + D+ +QWPE L +F + + D ++
Sbjct: 101 IRQKLVTCLTTETVTDVRKKIGDAVAEIARQYTDN--GDQWPELLGVLFQASQSPDAGLR 158
Query: 434 EAGIRMFTSVPGV 472
EA R+F++ PG+
Sbjct: 159 EAAFRIFSTTPGI 171
Score = 33.1 bits (72), Expect = 6.0
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 27 QLLNTLLSTDNDIRSQAEDAYNNIPTETKV-VHLVNSIQNADIAEDV--RQTAAVLLRRL 197
QLL L + DN +R+QAE+ NN + + V L+ + AE++ R AAVL RR+
Sbjct: 14 QLLRALTTPDNTVRTQAEEQLNNDWIQGRPDVLLMGLAEQIQGAEELVTRTFAAVLFRRI 73
>UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=15; Magnoliophyta|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1116
Score = 56.8 bits (131), Expect = 4e-07
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +2
Query: 224 PEIAI*AADSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 403
P ++ +++ LL +Q + ++ + +K+CD VSELA + D G WPE L FMF
Sbjct: 94 PNLSATTQANLKSILLDCVQRETAKTISKKLCDTVSELASGILPDGG---WPELLPFMFQ 150
Query: 404 CASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKAC*YL--LCSQMN 544
C ++ + ++EA + +F + G +LD + + +L L S MN
Sbjct: 151 CVTSSNFKLQEAALLIFAQLSQYIGETLLPHLDTLHSV-FLQSLASSMN 198
>UniRef50_A6R7C2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 1091
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/81 (29%), Positives = 48/81 (59%)
Frame = +2
Query: 251 SVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNI 430
++RE+LL +L + ++R K+ D V+E+A + D+ QW E L +F + + DP +
Sbjct: 100 AIREKLLESLGSESLAHVRNKIGDAVAEIAGQYADN--GEQWSELLGVLFQASQSTDPGM 157
Query: 431 KEAGIRMFTSVPGVFGNRQTE 493
+++ R+F++ PG+ + E
Sbjct: 158 RDSAFRIFSTTPGIIEKQHEE 178
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 27 QLLNTLLSTDNDIRSQAEDAYNNI----PTETKVVHLVNSIQNADIAEDVRQTAAVLLRR 194
QLL L S DN +R+QAE+ NN + ++ L +Q A+ A R AAVL RR
Sbjct: 14 QLLLALASADNIVRAQAEEQLNNEWVKGRPDVLLIGLAEQLQGAEDA-GTRSFAAVLFRR 72
Query: 195 L 197
+
Sbjct: 73 I 73
>UniRef50_A4QRM7 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1144
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/85 (31%), Positives = 49/85 (57%)
Frame = +2
Query: 245 ADSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDP 424
A+ +R++LL TL + + +R K+ D V+E+AR D+G + WP+ L +F + A D
Sbjct: 98 AEVIRQKLLQTLASESDRGVRNKISDAVAEVARQ-CSDNGVS-WPDLLAALFQLSMAPDA 155
Query: 425 NIKEAGIRMFTSVPGVFGNRQTENL 499
+E R+F + PG+ + E++
Sbjct: 156 GKREISFRVFATTPGIIEKQHEESV 180
Score = 37.1 bits (82), Expect = 0.37
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +3
Query: 15 AQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETK----VVHLVNSIQNADIAEDVRQTAAV 182
A+ QLL L S DN +RSQAED N T T+ ++ LV I +R ++AV
Sbjct: 10 AELGQLLEALQSPDNAVRSQAEDHLQNNWTVTRPEVLLMGLVELIGAQANTTTIRSSSAV 69
Query: 183 LLRRL 197
+ RR+
Sbjct: 70 IFRRI 74
>UniRef50_O74476 Cluster: Importin beta-3 subunit; n=1;
Schizosaccharomyces pombe|Rep: Importin beta-3 subunit -
Schizosaccharomyces pombe (Fission yeast)
Length = 1095
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/91 (27%), Positives = 48/91 (52%)
Frame = +2
Query: 218 VLPEIAI*AADSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 397
V I+ + S++ QLL + +R K+CD ++E+AR+ D G +WPE + +
Sbjct: 87 VFSSISNESKQSLQSQLLACFVKESVPTVRNKLCDTIAEIARSIYDCQG--EWPELINVI 144
Query: 398 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQT 490
F ++ D + +E+ R TS+P + + +
Sbjct: 145 FNAVNSPDESFRESVFRTITSLPRLLSGQDS 175
>UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2;
Caenorhabditis|Rep: Importin beta family protein 3 -
Caenorhabditis elegans
Length = 1092
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = +3
Query: 9 DQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLL 188
D QF +L+ L S DNDIR QAE+ Y I TKV L + + D R T V L
Sbjct: 2 DVNQFTELITKLQSADNDIRKQAEEVYEKIEGPTKVAALFEAYTHHTNNSDARSTVLVFL 61
Query: 189 RRLFS 203
RR+ +
Sbjct: 62 RRVLA 66
Score = 49.6 bits (113), Expect = 6e-05
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +2
Query: 302 LRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGN 481
+++K+ D++SE+A N IDD G+ W L+ M C ++D + + P +FGN
Sbjct: 100 IKKKIADLISEIASNLIDDSGDMTWGGVLELMDHCLKSEDLTGNYIALLILRGCPIIFGN 159
Query: 482 RQTENLDVIK 511
R L +K
Sbjct: 160 RLAHFLPTLK 169
>UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN binding
protein 5; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to RAN binding protein 5 - Rattus norvegicus
Length = 1056
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +3
Query: 78 EDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSA 206
E+ Y NIP +K+ L+ +I+N AE+ RQ AAVLLRRL S+
Sbjct: 154 EETYENIPGRSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSS 196
Score = 40.7 bits (91), Expect = 0.030
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 218 VLPEIAI*AADSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHI 352
V P + +++ +LL+ +QM+ +R+K+CD+ +ELARN I
Sbjct: 201 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKICDIAAELARNLI 245
>UniRef50_Q00SR0 Cluster: Karyopherin (Importin) beta 3; n=2;
Ostreococcus|Rep: Karyopherin (Importin) beta 3 -
Ostreococcus tauri
Length = 1517
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +2
Query: 248 DSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPN 427
+ V+ +LL L+ + + + RK CD++ E+A + D WPE + FMF+ S
Sbjct: 806 ERVKRELLNALREEPERKISRKTCDLICEVAAGGSERD--EPWPELMPFMFSAVSEGGEG 863
Query: 428 IKEAGIRMF 454
+KE+ + +F
Sbjct: 864 LKESALNVF 872
>UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1922, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 1180
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/71 (32%), Positives = 40/71 (56%)
Frame = +2
Query: 251 SVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNI 430
S++ LL +Q ++ + +K+CD VSELA + + ++G WP L FMF C + +
Sbjct: 840 SLKSILLGCIQRKNAKSISKKLCDTVSELASSILLENG---WPNLLSFMFQCMTFDSTKL 896
Query: 431 KEAGIRMFTSV 463
+EA +F +
Sbjct: 897 QEAVFLIFAQL 907
>UniRef50_Q6C1P3 Cluster: Similar to sp|P32337 Saccharomyces
cerevisiae YMR308c PSE1 beta karyopherin; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P32337 Saccharomyces
cerevisiae YMR308c PSE1 beta karyopherin - Yarrowia
lipolytica (Candida lipolytica)
Length = 1091
Score = 42.7 bits (96), Expect = 0.007
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +2
Query: 257 REQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKE 436
R LL + R K+CD ++EL D++ WP+ +Q +F A I+E
Sbjct: 101 RNILLGGFTQETDNSTRHKLCDAMAELVE---DENTQGSWPQLVQTLFEGTQAPSGGIRE 157
Query: 437 AGIRMFTSVPGVFGNRQTEN 496
+ R+ +VP V Q N
Sbjct: 158 SCFRLIATVPTVLNENQDIN 177
>UniRef50_Q22UQ4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1113
Score = 41.5 bits (93), Expect = 0.017
Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 248 DSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDD-DGNNQWPEFLQFMFTCASAQDP 424
++++ L L + + +R +CD + EL + ++D D NQWPE + +++ +
Sbjct: 135 NTIKTALFEMLTNEKNNTVRGLICDCIGELGGSLLEDKDAGNQWPELISIVWSLFMKESV 194
Query: 425 NIKEAGIRMFTSV 463
+ E+G ++ T++
Sbjct: 195 ELLESGFKILTNL 207
>UniRef50_A7PYL2 Cluster: Chromosome chr12 scaffold_38, whole genome
shotgun sequence; n=9; Magnoliophyta|Rep: Chromosome
chr12 scaffold_38, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1048
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +2
Query: 254 VREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIK 433
V++ L+ ++ M+ S +RR +VVS +A+ + +WP+ L F+F C+ + + +
Sbjct: 79 VKQSLIESITMEHSPPVRRASANVVSIVAKYAVPA---GEWPDLLPFLFQCSQSAQEDHR 135
Query: 434 EAGIRMFTSVPGVFG 478
E + +F+S+ G
Sbjct: 136 EVALILFSSLTETIG 150
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 30 LLNTLLSTDNDIRSQAEDAYNNIPTETKVV-HLVNSIQNADIAEDVRQTAAVLLRR 194
LL L DND R QAE+ + + +V+ L++ ++ A +VRQ +AVLLR+
Sbjct: 8 LLIQFLMPDNDARRQAEEQIKRLAKDPQVIPALIHHLRTAK-TPNVRQLSAVLLRK 62
>UniRef50_A5AVQ9 Cluster: Putative uncharacterized protein; n=2;
Magnoliophyta|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1028
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +2
Query: 254 VREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIK 433
V++ L+ ++ M+ S +RR +VVS +A+ + +WP+ L F+F C+ + + +
Sbjct: 79 VKQSLIESITMEHSPPVRRASANVVSIVAKYAVPA---GEWPDLLPFLFQCSQSAQEDHR 135
Query: 434 EAGIRMFTSVPGVFG 478
E + +F+S+ G
Sbjct: 136 EVALILFSSLTETIG 150
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 30 LLNTLLSTDNDIRSQAEDAYNNIPTETKVV-HLVNSIQNADIAEDVRQTAAVLLRR 194
LL L DND R QAE+ + + +V+ L++ ++ A +VRQ +AVLLR+
Sbjct: 8 LLIQFLMPDNDARRQAEEQIKRLAKDPQVIPALIHHLRTAK-TPNVRQLSAVLLRK 62
>UniRef50_A0CES7 Cluster: Chromosome undetermined scaffold_172,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_172,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1081
Score = 40.7 bits (91), Expect = 0.030
Identities = 15/68 (22%), Positives = 39/68 (57%)
Frame = +2
Query: 248 DSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPN 427
++V+ L +++++S +R ++CD + E+ + +DD +N+W L ++ + + +
Sbjct: 88 ETVKLHLFQFIEVEMSHIVRNQLCDTIGEIGGSLYEDDSHNEWHNLLPTLWQMFLSPNND 147
Query: 428 IKEAGIRM 451
I E G ++
Sbjct: 148 IIECGFKI 155
>UniRef50_Q4Q561 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1082
Score = 40.3 bits (90), Expect = 0.039
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 9 DQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAED--VRQTAAV 182
D + LLN L S DN R AE+ YN + + V + + + ++D VR + V
Sbjct: 2 DSSHLIALLNGLRSADNQERKSAEEHYNGMVASSPVWMMCALAETSATSQDTSVRTMSLV 61
Query: 183 LLRRLFSA 206
LLR+LF+A
Sbjct: 62 LLRKLFNA 69
>UniRef50_A2FDC7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1006
Score = 40.3 bits (90), Expect = 0.039
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Frame = +3
Query: 33 LNTLLSTDNDIRSQAEDAYN----NIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRL 197
L STDN+ RSQAE +N N P E+ +V L+N IQ+++ E ++ T AVLL R+
Sbjct: 11 LTACYSTDNEQRSQAEAQFNQIFQNFPQES-IVELLNLIQSSN--ERLKNTGAVLLHRM 66
>UniRef50_P32337 Cluster: Importin beta-3 subunit; n=10;
Saccharomycetales|Rep: Importin beta-3 subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1089
Score = 39.9 bits (89), Expect = 0.052
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +2
Query: 254 VREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIK 433
+R LL + + +R K+ D ++E ++ + WPE LQ + + +PN +
Sbjct: 102 IRSSLLKGFLSERADSIRHKLSDAIAECVQDDLP-----AWPELLQALIESLKSGNPNFR 156
Query: 434 EAGIRMFTSVP 466
E+ R+ T+VP
Sbjct: 157 ESSFRILTTVP 167
>UniRef50_Q00WP4 Cluster: Karyopherin (Importin) beta 3; n=1;
Ostreococcus tauri|Rep: Karyopherin (Importin) beta 3 -
Ostreococcus tauri
Length = 1024
Score = 37.9 bits (84), Expect = 0.21
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +2
Query: 305 RRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNR 484
R + DV++++AR + N+WPE L+FM CA++ + + R+F S+ +
Sbjct: 45 RNALLDVIAKIARWCVP---TNEWPELLEFMGQCANSPETAHRALAFRLFESLTETIASA 101
Query: 485 QTENLDVI 508
+E+ +
Sbjct: 102 LSEHFGTL 109
>UniRef50_A7PYY0 Cluster: Chromosome chr4 scaffold_39, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_39, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1100
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +2
Query: 323 VVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLD 502
V L + +D ++WPE + FM C A D ++E + +F + G + + D
Sbjct: 119 VAKILCKLALDVAVESEWPELVPFMLRCFEASDIRVQETSLFLFGLLSETLGGKLSCEPD 178
Query: 503 VIKAC*YLLCSQMNQW 550
+++ +L C W
Sbjct: 179 KLQSL-FLKCLGCENW 193
>UniRef50_A4S6V4 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 979
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +2
Query: 248 DSVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPN 427
D + LL S+ LR V DV++++AR + +W E L+F+ CAS+ +
Sbjct: 36 DEAKRALLDRAMTAESKALRNAVLDVIAKIARWTVPQ---GEWNELLEFLGQCASSPETA 92
Query: 428 IKEAGIRMFTSV 463
+ ++F S+
Sbjct: 93 HRALAFKLFESL 104
>UniRef50_Q4UGM1 Cluster: Importin (Karyopherin) beta, putative;
n=3; Piroplasmida|Rep: Importin (Karyopherin) beta,
putative - Theileria annulata
Length = 1312
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/66 (21%), Positives = 33/66 (50%)
Frame = +2
Query: 254 VREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIK 433
++ LL +++ + Q +RR VCD +++L + +WPE +P +
Sbjct: 95 LKSSLLKSIESETHQSIRRNVCDTIADLVSRSMSP---GEWPELSSITIRLIQNDNPLYR 151
Query: 434 EAGIRM 451
++G+++
Sbjct: 152 KSGLKL 157
>UniRef50_A5FBC8 Cluster: TonB-dependent receptor, plug precursor;
n=1; Flavobacterium johnsoniae UW101|Rep: TonB-dependent
receptor, plug precursor - Flavobacterium johnsoniae
UW101
Length = 1129
Score = 34.3 bits (75), Expect = 2.6
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +3
Query: 15 AQFYQLLNTLLSTDNDIR--SQAEDAYNNIPTETKVVHLVNSIQNADIA---EDVRQTAA 179
AQ + ++ T + + R S DAYN P++ HLVN+ A+ A D +TA
Sbjct: 603 AQKHHIIATFVQEAEERRFWSDGMDAYNIQPSDALGFHLVNTATMANSAIRSNDTHETAD 662
Query: 180 VLLRRLFSAXXXXXXXXXXXXQQTVSENNCYSPFKWIFPS 299
L+ RLF + + S +P+ +FPS
Sbjct: 663 ALMARLFYSFDNRYMLTATIRRDGYSAFGASNPYA-VFPS 701
>UniRef50_Q54EW3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1067
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/71 (18%), Positives = 40/71 (56%)
Frame = +2
Query: 251 SVREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNI 430
+++ +L+ ++ + ++R + +V++ LA + + +WPE L F+ +S+ + N+
Sbjct: 86 TLKTELMFAVREEPKNHIRHSILNVIAILAIQLVPEQ---KWPEILSFIIESSSSPEENL 142
Query: 431 KEAGIRMFTSV 463
+E+ + ++
Sbjct: 143 RESSFYLIGAI 153
>UniRef50_Q8TI39 Cluster: Phycocyanin alpha phycocyanobilin lyase
related protein; n=2; Methanosarcina|Rep: Phycocyanin
alpha phycocyanobilin lyase related protein -
Methanosarcina acetivorans
Length = 508
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 9 DQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLL 188
D+ +L+ L S DIR A +A N+ E V HLV + ADI+ +VR + L
Sbjct: 342 DEKALAAILSRLDSPYPDIRKHAAEALGNLRDEKAVPHLVKKL--ADISPEVRNASVYAL 399
Query: 189 RRL 197
L
Sbjct: 400 GNL 402
>UniRef50_Q381P8 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 1072
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 9 DQAQFYQLLNTLLSTDNDIRSQAEDAYNNI--PTETKVVHLVNSIQNADIAEDVRQTAAV 182
+Q Q QL+ LLS DN++R AE Y+++ T ++ ++ + + Q V
Sbjct: 2 NQEQLNQLVTNLLSADNEVRKSAEAQYDSLVHGNATWMMCCLSELCASTENTSTMQMGLV 61
Query: 183 LLRRLF 200
LL++LF
Sbjct: 62 LLKKLF 67
>UniRef50_Q94LC1 Cluster: Putative uncharacterized protein
OSJNBa0026A15.29; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBa0026A15.29 - Oryza sativa
(Rice)
Length = 151
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 80 GRIQQHSNRNKSSAPSEFNSKCRHCRRCASNGGRA 184
GRIQ+ ++ AP+EF S C RR GGR+
Sbjct: 8 GRIQRPASATPCCAPAEFGSACGPARRTTIGGGRS 42
>UniRef50_A2DTC5 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 490
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/60 (23%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +3
Query: 27 QLLNTLLSTDNDIRSQAEDAYNNIPTETKV-VHLVNSIQNADIAEDVRQTAAVLLRRLFS 203
++LN D DI+++ ++ +++ + ++L++++ N D+++ R +A+L+RR F+
Sbjct: 14 KMLNASQDFDQDIQNEIFRDMSSFQSQSDIALYLLSAVANGDLSDTSRCVSAILMRRFFA 73
>UniRef50_A4BZR8 Cluster: Putative uncharacterized protein; n=1;
Polaribacter irgensii 23-P|Rep: Putative uncharacterized
protein - Polaribacter irgensii 23-P
Length = 132
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 243 QQTVSENNCYSPFKWIFPSTYEERFVM*SLNWLGIILMTMATTSGLSSYSSCL 401
++TV ENN Y +KW++ Y F + N L ++ ++ T L +Y+S +
Sbjct: 51 KETVQENN-YKEYKWVWCGRYSVPFGLAFANKLNLLQSKVSLTGDLLAYASSI 102
>UniRef50_A7T0R7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +2
Query: 254 VREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIK 433
+++ LL L + +R V VVS +A++ + QWPE L F+ +Q+ +
Sbjct: 78 LKQGLLQVLTQESVPLVRHSVGQVVSMIAKHELPA---GQWPELLLFLQEYVRSQEAANR 134
Query: 434 EAGIRMFTSVPGVFGNR 484
E G+ + +SV G +
Sbjct: 135 EMGMFVLSSVTESVGEQ 151
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,735,145
Number of Sequences: 1657284
Number of extensions: 11751650
Number of successful extensions: 27233
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 26410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27224
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -