Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00405
(649 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro... 108 6e-24
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ... 108 6e-24
U57758-1|AAB49932.1| 360|Drosophila melanogaster putative thyro... 30 3.1
AY071174-1|AAL48796.1| 195|Drosophila melanogaster RE22911p pro... 30 3.1
AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p pro... 30 3.1
AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9 signalo... 30 3.1
AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P... 30 3.1
AE014297-892|AAF54348.1| 195|Drosophila melanogaster CG9740-PA ... 30 3.1
AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB... 30 3.1
AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA... 30 3.1
AE014296-335|AAF47551.2| 858|Drosophila melanogaster CG7991-PA ... 28 9.5
>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p
protein.
Length = 1000
Score = 108 bits (260), Expect = 6e-24
Identities = 42/84 (50%), Positives = 69/84 (82%)
Frame = +2
Query: 260 EQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEA 439
+Q+LL +Q +++ LRRK+C+VV+E+ARN ID+D NNQWP+ LQF+F CA++ P ++E+
Sbjct: 88 QQILLAVQQEVTPQLRRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQLQES 147
Query: 440 GIRMFTSVPGVFGNRQTENLDVIK 511
+R+F+SVP +FGN++ + +D+IK
Sbjct: 148 ALRIFSSVPSIFGNQEAQYIDLIK 171
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = +3
Query: 3 ARDQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAV 182
A DQA F QLL +LLSTDND+R QAE+AYNN+ E KV HL+ +IQN +E+ RQ AAV
Sbjct: 2 AADQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAV 61
Query: 183 LLRRLFS 203
LLRRLF+
Sbjct: 62 LLRRLFT 68
Score = 38.7 bits (86), Expect = 0.007
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 508 KGMLISALQPNESMALRTQAVKAVGAFILLHDKE 609
K ML ++ +R QAV+AVGAFIL HDKE
Sbjct: 171 KQMLAKSMDAGSDPEVRVQAVRAVGAFILYHDKE 204
>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
protein.
Length = 1105
Score = 108 bits (260), Expect = 6e-24
Identities = 42/84 (50%), Positives = 69/84 (82%)
Frame = +2
Query: 260 EQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEA 439
+Q+LL +Q +++ LRRK+C+VV+E+ARN ID+D NNQWP+ LQF+F CA++ P ++E+
Sbjct: 88 QQILLAVQQEVTPQLRRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQLQES 147
Query: 440 GIRMFTSVPGVFGNRQTENLDVIK 511
+R+F+SVP +FGN++ + +D+IK
Sbjct: 148 ALRIFSSVPSIFGNQEAQYIDLIK 171
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = +3
Query: 3 ARDQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAV 182
A DQA F QLL +LLSTDND+R QAE+AYNN+ E KV HL+ +IQN +E+ RQ AAV
Sbjct: 2 AADQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAV 61
Query: 183 LLRRLFS 203
LLRRLF+
Sbjct: 62 LLRRLFT 68
Score = 38.7 bits (86), Expect = 0.007
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 508 KGMLISALQPNESMALRTQAVKAVGAFILLHDKE 609
K ML ++ +R QAV+AVGAFIL HDKE
Sbjct: 171 KQMLAKSMDAGSDPEVRVQAVRAVGAFILYHDKE 204
>U57758-1|AAB49932.1| 360|Drosophila melanogaster putative thyroid
receptor interactingprotein protein.
Length = 360
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 18 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 158
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AY071174-1|AAL48796.1| 195|Drosophila melanogaster RE22911p
protein.
Length = 195
Score = 29.9 bits (64), Expect = 3.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 110 KSSAPSEFNSKCRHCRRCASN 172
K P ++ + C HCR+C SN
Sbjct: 32 KDGEPKKYRALCTHCRKCQSN 52
>AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p
protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 18 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 158
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9
signalosome subunit 2 CSN2 protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 18 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 158
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA,
isoform A protein.
Length = 1357
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 83 RIQQHSNRNK-SSAPSEFNSKCRHCRRCASNGGRAVTKII*CRI 211
+++QH+N N +S PS RHC RC + GR + CR+
Sbjct: 10 QLEQHNNHNAHTSDPS------RHCARCTTELGRITNRGAPCRV 47
>AE014297-892|AAF54348.1| 195|Drosophila melanogaster CG9740-PA
protein.
Length = 195
Score = 29.9 bits (64), Expect = 3.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 110 KSSAPSEFNSKCRHCRRCASN 172
K P ++ + C HCR+C SN
Sbjct: 32 KDGEPKKYRALCTHCRKCQSN 52
>AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB,
isoform B protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 18 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 158
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA,
isoform A protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 18 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 158
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014296-335|AAF47551.2| 858|Drosophila melanogaster CG7991-PA
protein.
Length = 858
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 397 VYLCQCARSKHQRSWY*NVYVCTR 468
V LC+C SK QR W+ YV TR
Sbjct: 821 VTLCECRESKDQRQWF---YVRTR 841
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,300,846
Number of Sequences: 53049
Number of extensions: 577023
Number of successful extensions: 1215
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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