Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00404
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 229 LDKLKAERDVGITIDIALWKFETSKYYVTII 321
           L KLK    +G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 229 LDKLKAERDVGITIDIALWKFETSKYYVTII 321
           L KLK    +G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -2

Query: 315 GNIVLASFELPESNIDCDTDVTLSL*FVQYPSIFEG 208
           GNI +  + +P  NI+   +V L+   + +  + +G
Sbjct: 151 GNIAMELWNMPRENIEPLPNVILACHMLSFLMVHQG 186


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 336 QRFHQEHDHRNLS 374
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,490
Number of Sequences: 336
Number of extensions: 2854
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)