Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00404
(589 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 315 2e-88
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 311 3e-87
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 196 1e-52
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 168 4e-44
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 0.41
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 0.52
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.96
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.2
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 5.1
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 9.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.0
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.0
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 9.0
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 315 bits (773), Expect = 2e-88
Identities = 150/154 (97%), Positives = 151/154 (98%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERDVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 411
DKLKAER+ GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 412 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVTK 513
GEFEAGISKNGQTREHALLAFTLGVKQLIVGV K
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 154
Score = 46.8 bits (106), Expect = 2e-07
Identities = 22/28 (78%), Positives = 25/28 (89%), Gaps = 1/28 (3%)
Frame = +3
Query: 507 NKMDSTEPPYSEPRFEEI-RGVSSYIRR 587
NKMDSTEPPYSE RFEEI + VSSYI++
Sbjct: 153 NKMDSTEPPYSETRFEEIKKEVSSYIKK 180
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 311 bits (764), Expect = 3e-87
Identities = 148/154 (96%), Positives = 150/154 (97%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERDVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 411
DKLKAER+ GITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 412 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVTK 513
GEFEAGISKNGQTREHALLAFTLGVKQLIVGV K
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 154
Score = 43.6 bits (98), Expect = 1e-06
Identities = 20/28 (71%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +3
Query: 507 NKMDSTEPPYSEPRFEEI-RGVSSYIRR 587
NKMD T+PPYSE RFEEI + VSSYI++
Sbjct: 153 NKMDMTDPPYSEARFEEIKKEVSSYIKK 180
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 196 bits (479), Expect = 1e-52
Identities = 94/97 (96%), Positives = 95/97 (97%)
Frame = +1
Query: 223 WVLDKLKAERDVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 402
WVLDKLKAER+ GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 403 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVTK 513
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGV K
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 97
Score = 46.8 bits (106), Expect = 2e-07
Identities = 22/28 (78%), Positives = 25/28 (89%), Gaps = 1/28 (3%)
Frame = +3
Query: 507 NKMDSTEPPYSEPRFEEI-RGVSSYIRR 587
NKMDSTEPPYSE RFEEI + VSSYI++
Sbjct: 96 NKMDSTEPPYSETRFEEIKKEVSSYIKK 123
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 168 bits (408), Expect = 4e-44
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = +1
Query: 271 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 450
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 451 REHALLAFTLGVKQLIVGVTK 513
REHALLAFTLGVKQLIVGV K
Sbjct: 61 REHALLAFTLGVKQLIVGVNK 81
Score = 46.8 bits (106), Expect = 2e-07
Identities = 22/28 (78%), Positives = 25/28 (89%), Gaps = 1/28 (3%)
Frame = +3
Query: 507 NKMDSTEPPYSEPRFEEI-RGVSSYIRR 587
NKMDSTEPPYSE RFEEI + VSSYI++
Sbjct: 80 NKMDSTEPPYSETRFEEIKKEVSSYIKK 107
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 310 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 414
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.42
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 64 KTHINIVVIGHVDSGKST 117
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect(2) = 0.41
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 295 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 396
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
Score = 20.6 bits (41), Expect(2) = 0.41
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 502 GVTKWIPLNHHTVSPDLRKSEE 567
G+ W+P NH + R EE
Sbjct: 338 GIPNWVPGNHDQLRLVSRFGEE 359
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect(2) = 0.52
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 295 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 396
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
Score = 20.6 bits (41), Expect(2) = 0.52
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 502 GVTKWIPLNHHTVSPDLRKSEE 567
G+ W+P NH + R EE
Sbjct: 338 GIPNWVPGNHDQLRLVSRFGEE 359
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.96
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 73 INIVVIGHVDSGKST 117
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 65 FSLPIFG*SRITNCV*Y 15
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 563 SDFLKSGLTVWWFSGIH 513
S F++SG+T W S I+
Sbjct: 57 SHFIESGITAIWLSPIN 73
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMG 201
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 456 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 370
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMG 201
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMG 201
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,164
Number of Sequences: 438
Number of extensions: 3150
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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