Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00402
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.7  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/27 (29%), Positives = 10/27 (37%)
 Frame = -3

Query: 590 IFLMYEDTPSGFPQIWAHCMVVQWNPF 510
           +FL  E      PQ W      QW  +
Sbjct: 180 VFLFEEKQVQSMPQCWIDLQTWQWKVY 206



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 335 QRFHQEHDHRNLS 373
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 569 TPSGFPQIWAHCMVV 525
           TP+    +W+HC  V
Sbjct: 141 TPNATNTVWSHCQCV 155


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 569 TPSGFPQIWAHCMVV 525
           TP+    +W+HC  V
Sbjct: 141 TPNATNTVWSHCQCV 155


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 649 CCLRAIQKWARKRQQLGCSQSS*CMRIL 566
           CC  A+      RQ +  S+   C+R +
Sbjct: 615 CCYHAVAPGTDIRQSIALSRKKKCIRYM 642


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 649 CCLRAIQKWARKRQQLGCSQSS*CMRIL 566
           CC  A+      RQ +  S+   C+R +
Sbjct: 507 CCYHAVAPGTDIRQSIALSRKKKCIRYM 534


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,333
Number of Sequences: 336
Number of extensions: 3605
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)