Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00395
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-645|AAF47762.1|  914|Drosophila melanogaster CG14961-PA...    29   5.1  
U24245-1|AAA65114.1|   98|Drosophila melanogaster L71-6 protein.       29   6.7  
U23836-5|AAA74180.1|  126|Drosophila melanogaster L71-6 protein.       29   6.7  
AE014296-2559|AAF49594.1|   98|Drosophila melanogaster CG7336-PA...    29   6.7  
M25294-1|AAA17842.1|  151|Drosophila melanogaster dsx protein.         28   8.9  
AE014297-674|AAF54169.1|  549|Drosophila melanogaster CG11094-PA...    28   8.9  

>AE014296-645|AAF47762.1|  914|Drosophila melanogaster CG14961-PA
           protein.
          Length = 914

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 392 LKDLSEATTSTTKTGRL-RKRSHSLRPSHFSEPCPRHS 502
           L+  ++  +  +K GRL R+R+HS RPS   +P   HS
Sbjct: 102 LQPPAQGQSPMSKNGRLPRRRNHSRRPSIHQQPPSPHS 139


>U24245-1|AAA65114.1|   98|Drosophila melanogaster L71-6 protein.
          Length = 98

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 196 NWRDLTRCRPINSSCLM 246
           NWR LTRC  + +SC++
Sbjct: 63  NWRKLTRCELVKASCIV 79


>U23836-5|AAA74180.1|  126|Drosophila melanogaster L71-6 protein.
          Length = 126

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 196 NWRDLTRCRPINSSCLM 246
           NWR LTRC  + +SC++
Sbjct: 63  NWRKLTRCELVKASCIV 79


>AE014296-2559|AAF49594.1|   98|Drosophila melanogaster CG7336-PA
           protein.
          Length = 98

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 196 NWRDLTRCRPINSSCLM 246
           NWR LTRC  + +SC++
Sbjct: 63  NWRKLTRCELVKASCIV 79


>M25294-1|AAA17842.1|  151|Drosophila melanogaster dsx protein.
          Length = 151

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 410 ATTSTTKTGRLRKRSHSLRPSHFSEPCPRHS 502
           ATTS+T T   R+RS S  P+    P P HS
Sbjct: 102 ATTSSTPTLSRRQRSRSATPTTPPPPPPAHS 132


>AE014297-674|AAF54169.1|  549|Drosophila melanogaster CG11094-PA,
           isoform A protein.
          Length = 549

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 410 ATTSTTKTGRLRKRSHSLRPSHFSEPCPRHS 502
           ATTS+T T   R+RS S  P+    P P HS
Sbjct: 500 ATTSSTPTLSRRQRSRSATPTTPPPPPPAHS 530


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,090,850
Number of Sequences: 53049
Number of extensions: 491841
Number of successful extensions: 1197
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)