Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00392
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    25   0.79 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   1.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   1.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.4  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   5.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.4  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
 Frame = -2

Query: 686 YLNLLPQWQKSDEITSRF*GS------ARYGASIAPYLASF 582
           +L++LPQ   + +IT RF G        +YG ++ PYL+S+
Sbjct: 91  FLSVLPQL--AWDITYRFYGGFLLCKVVKYGQTLGPYLSSY 129



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 9/41 (21%)
 Frame = +1

Query: 583 KEAKYGAILAPYLA---------DPQNLLVISSDFCHWGSR 678
           K  KYG  L PYL+         D    +     +C W SR
Sbjct: 114 KVVKYGQTLGPYLSSYVLMATAIDRHQAICYPLTYCSWTSR 154


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = +3

Query: 435 PH-VNSIEWTSRPMKMSIPLKCTYLTSQSHGGVQNQFHDYTDF 560
           PH V   +W       SI LK  +  S++ GGV     D  DF
Sbjct: 322 PHIVKGNQWLGFDDPKSIQLKVEFANSKNLGGVMVWSLDTDDF 364


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = +3

Query: 435 PH-VNSIEWTSRPMKMSIPLKCTYLTSQSHGGVQNQFHDYTDF 560
           PH V   +W       SI LK  +  S++ GGV     D  DF
Sbjct: 322 PHIVKGNQWLGFDDPKSIQLKVEFANSKNLGGVMVWSLDTDDF 364


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +3

Query: 453 EWTSRPMKMSIPLKCTYLTSQSHGGVQNQFHDYTDFSRL 569
           +W       S+ +K  ++ S+ +GG      D  DF  L
Sbjct: 341 QWVGYEDPESVQIKMDWIKSKGYGGAMTWAIDMDDFHGL 379


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 169 RQLDLWLSKADLTHGPARAIIAPHAGYSYAALARRTHIDKSV 294
           R +D+  S  D +     A +A  AG+ +     R HI  SV
Sbjct: 56  RAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESRAHIHCSV 97


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 422 VYLFIDGEIVEGSLVLVEGRKSASCD 345
           +YL+ DG +      L+EGR+   CD
Sbjct: 11  IYLYHDGRVK-----LLEGRRVVDCD 31


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +3

Query: 453 EWTSRPMKMSIPLKCTYLTSQSHGGVQNQFHDYTDFSRLSDSR 581
           +W       SI +K  Y  S +  GV     +  DF+ LS ++
Sbjct: 333 QWVGYDNPKSIAIKVQYAKSLNLAGVMIWSIETDDFNGLSGTK 375


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,889
Number of Sequences: 336
Number of extensions: 3724
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)