Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00392
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p pro...   171   8e-43
AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA...   171   8e-43
AE014297-4648|AAF57074.2|  462|Drosophila melanogaster CG15541-P...    30   3.5  

>AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p
           protein.
          Length = 295

 Score =  171 bits (416), Expect = 8e-43
 Identities = 97/202 (48%), Positives = 126/202 (62%), Gaps = 6/202 (2%)
 Frame = +1

Query: 106 MSCRQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHAGYSY----AALARR 273
           MS R+A HAG WYT++G+ELSRQLD WL  ADL+HGPARAIIAPHAGY+Y    AA A R
Sbjct: 1   MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYR 60

Query: 274 --THIDKSVLWLLNESSYWAHHTT*GSQDALFRPSTSTRLPSTISPSINKYTRS*GHTSI 447
             + +    +++L  S    H    G   ++ +   +      I   IN      G  S 
Sbjct: 61  QVSPVVVKRIFILGPSH---HVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSW 117

Query: 448 R*NGRADR*K*AFH*NAPTLLAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLAD 627
             + + D  + +   + P  +AKVME+YK  FTI+PILVGSL PE+EA+YG++L+ YL D
Sbjct: 118 M-DMKTDEDEHSIEMHLP-YIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMD 175

Query: 628 PQNLLVISSDFCHWGSRFRYTW 693
           P NL VISSDFCHWG RF YT+
Sbjct: 176 PTNLFVISSDFCHWGHRFSYTY 197



 Score =  104 bits (249), Expect = 1e-22
 Identities = 47/59 (79%), Positives = 52/59 (88%)
 Frame = +3

Query: 255 CGACSAYAYRQVSPVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAEL 431
           CGAC+A+AYRQVSPVVVKRIFILGPSHHVR+ GCALS   KY+TPLYDL ID QI +EL
Sbjct: 51  CGACAAFAYRQVSPVVVKRIFILGPSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSEL 109



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 431 EATRQFDRMDEQTDENEHSIEMHLPY 508
           E T +F  MD +TDE+EHSIEMHLPY
Sbjct: 110 EKTGKFSWMDMKTDEDEHSIEMHLPY 135


>AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA
           protein.
          Length = 295

 Score =  171 bits (416), Expect = 8e-43
 Identities = 97/202 (48%), Positives = 126/202 (62%), Gaps = 6/202 (2%)
 Frame = +1

Query: 106 MSCRQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHAGYSY----AALARR 273
           MS R+A HAG WYT++G+ELSRQLD WL  ADL+HGPARAIIAPHAGY+Y    AA A R
Sbjct: 1   MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYR 60

Query: 274 --THIDKSVLWLLNESSYWAHHTT*GSQDALFRPSTSTRLPSTISPSINKYTRS*GHTSI 447
             + +    +++L  S    H    G   ++ +   +      I   IN      G  S 
Sbjct: 61  QVSPVVVKRIFILGPSH---HVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSW 117

Query: 448 R*NGRADR*K*AFH*NAPTLLAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLAD 627
             + + D  + +   + P  +AKVME+YK  FTI+PILVGSL PE+EA+YG++L+ YL D
Sbjct: 118 M-DMKTDEDEHSIEMHLP-YIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMD 175

Query: 628 PQNLLVISSDFCHWGSRFRYTW 693
           P NL VISSDFCHWG RF YT+
Sbjct: 176 PTNLFVISSDFCHWGHRFSYTY 197



 Score =  104 bits (249), Expect = 1e-22
 Identities = 47/59 (79%), Positives = 52/59 (88%)
 Frame = +3

Query: 255 CGACSAYAYRQVSPVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAEL 431
           CGAC+A+AYRQVSPVVVKRIFILGPSHHVR+ GCALS   KY+TPLYDL ID QI +EL
Sbjct: 51  CGACAAFAYRQVSPVVVKRIFILGPSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSEL 109



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 431 EATRQFDRMDEQTDENEHSIEMHLPY 508
           E T +F  MD +TDE+EHSIEMHLPY
Sbjct: 110 EKTGKFSWMDMKTDEDEHSIEMHLPY 135


>AE014297-4648|AAF57074.2|  462|Drosophila melanogaster CG15541-PA
           protein.
          Length = 462

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 455 FYRIDVWPQLRVYLFIDGEIVEGSLVLVEG 366
           F    +WPQLR  L +DG ++E  ++ + G
Sbjct: 397 FISYSLWPQLRKILPLDGPLIENRVLRIRG 426


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,103,808
Number of Sequences: 53049
Number of extensions: 679249
Number of successful extensions: 1741
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)