Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00391
(639 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 109 3e-25
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 108 8e-25
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 94 1e-20
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 92 5e-20
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 73 4e-14
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 54 1e-08
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 46 5e-06
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 31 0.11
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 27 3.0
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.0
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 4.0
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 26 5.3
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 9.2
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 25 9.2
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 25 9.2
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 25 9.2
SPAC637.11 |suv3||ATP-dependent RNA helicase Suv3|Schizosaccharo... 25 9.2
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 25 9.2
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 109 bits (262), Expect = 3e-25
Identities = 54/73 (73%), Positives = 56/73 (76%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIETAGGVMT LIKRN YSDNQPGVLIQVFEGE A TKD NLLGKFEL
Sbjct: 400 GIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFEL 459
Query: 475 TGIPPAPRGVPQL 513
+GIPPAPRGVPQ+
Sbjct: 460 SGIPPAPRGVPQI 472
Score = 108 bits (259), Expect = 8e-25
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2
Query: 11 ADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 190
ADLFR TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPD
Sbjct: 305 ADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPD 364
Query: 191 EXXXXXXXXXXXILHGDKSEE 253
E +L GD SE+
Sbjct: 365 EAVAYGAAVQAAVLTGDTSEK 385
Score = 77.4 bits (182), Expect = 2e-15
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+
Sbjct: 472 IEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEID 514
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 108 bits (259), Expect = 8e-25
Identities = 52/81 (64%), Positives = 63/81 (77%)
Frame = +2
Query: 11 ADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 190
ADLFR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPD
Sbjct: 305 ADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPD 364
Query: 191 EXXXXXXXXXXXILHGDKSEE 253
E IL GD SE+
Sbjct: 365 EAVAYGAAVQAAILVGDTSEK 385
Score = 108 bits (259), Expect = 8e-25
Identities = 53/73 (72%), Positives = 56/73 (76%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIETAGGVMT LIKRN Y+DNQPGVLIQVFEGE A TKD NLLGKFEL
Sbjct: 400 GIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFEL 459
Query: 475 TGIPPAPRGVPQL 513
+GIPPAPRGVPQ+
Sbjct: 460 SGIPPAPRGVPQI 472
Score = 77.4 bits (182), Expect = 2e-15
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+
Sbjct: 472 IEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEID 514
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 94.3 bits (224), Expect = 1e-20
Identities = 41/62 (66%), Positives = 54/62 (87%)
Frame = +2
Query: 8 SADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 187
+A F++T++PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINP
Sbjct: 308 NATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINP 367
Query: 188 DE 193
DE
Sbjct: 368 DE 369
Score = 52.4 bits (120), Expect = 5e-08
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +3
Query: 501 RASIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
+A +E TF++DANGIL V+A+EK+T + I ITN G LS +I+
Sbjct: 474 QAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQ 519
Score = 51.2 bits (117), Expect = 1e-07
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ G V + RN +DNQ V V++GE +N LG+F+L
Sbjct: 405 GVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQL 464
Query: 475 TGIPPAPRGVPQL 513
TGIPP PRG +L
Sbjct: 465 TGIPPMPRGQAEL 477
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 92.3 bits (219), Expect = 5e-20
Identities = 46/73 (63%), Positives = 50/73 (68%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGVMT LI RN DNQ VLIQV+EGE +TKDNNLLGKF+L
Sbjct: 429 GIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDL 488
Query: 475 TGIPPAPRGVPQL 513
GIPPAPRGVPQ+
Sbjct: 489 RGIPPAPRGVPQI 501
Score = 85.4 bits (202), Expect = 6e-18
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLF+ T++PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE
Sbjct: 338 DLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDE 396
Query: 194 XXXXXXXXXXXILHGDKSEE 253
+L G++ +
Sbjct: 397 AVAYGAAVQAGVLSGEEGSD 416
Score = 60.1 bits (139), Expect = 3e-10
Identities = 28/44 (63%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIE 638
IEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E+IE
Sbjct: 501 IEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIE 544
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 72.9 bits (171), Expect = 4e-14
Identities = 35/73 (47%), Positives = 44/73 (60%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGV T LI RN +D Q V I+VF+GE + +DN L+G F+L
Sbjct: 443 GIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQL 502
Query: 475 TGIPPAPRGVPQL 513
TGI PAP+G PQ+
Sbjct: 503 TGIAPAPKGQPQI 515
Score = 58.4 bits (135), Expect = 8e-10
Identities = 26/74 (35%), Positives = 47/74 (63%)
Frame = +2
Query: 17 LFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEX 196
L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE
Sbjct: 355 LVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEA 413
Query: 197 XXXXXXXXXXILHG 238
+L G
Sbjct: 414 VAIGAAIQGGVLSG 427
Score = 52.0 bits (119), Expect = 7e-08
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE
Sbjct: 515 IEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIE 556
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 54.4 bits (125), Expect = 1e-08
Identities = 21/60 (35%), Positives = 42/60 (70%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
D+ + +EP+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 342 DMEDAAVEPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 46.0 bits (104), Expect = 5e-06
Identities = 21/52 (40%), Positives = 37/52 (71%)
Frame = +2
Query: 38 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 322 PIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 31.5 bits (68), Expect = 0.11
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +2
Query: 41 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 178
V +++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 341 VTEAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = +3
Query: 9 APICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 104
A ICS LP + W + S PR+ R S ++ WW
Sbjct: 131 AEICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 89 RGFEPYPSWHHGETSPLAP 33
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 341 TLPSPLNRLRHSPPTLITNPEYSSKYLR 424
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.8 bits (54), Expect = 5.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 411 DEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILPSSD 244
D+YS L + + EC+++F + D S+ N EGK ++LP D
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLD 397
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.0 bits (52), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 285 GCYIKQQQILPSSDLSPCKI 226
GCY P+ DLSP KI
Sbjct: 522 GCYSGSSSTYPAIDLSPAKI 541
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 9.2
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 537 NGILNVSAIEKSTNKENKITITNDKGRLSKEE 632
+GIL+ + IEK +K K+ + N+ G++S ++
Sbjct: 154 DGILSFTVIEKVDDKNLKVRV-NNNGKISSKK 184
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 25.0 bits (52), Expect = 9.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 531 DANGILNVSAIEKSTNKENKITITNDKGRLSKEE 632
D LNVS + S +E +T ++ R+ +EE
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREE 91
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 9.2
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 486 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLS 364
WD G+ ++ I GHS +L L+ S L +S
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLENGSVLTANYNSASIS 101
>SPAC637.11 |suv3||ATP-dependent RNA helicase
Suv3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 25.0 bits (52), Expect = 9.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 592 ILFSLLVDFSIAETLRIPLASMSKVTSIEARHAAPVGSRSA 470
I+FS L FS T+ IP+ + ++ RH P GS+ +
Sbjct: 409 IVFSDLKKFSGVSTIDIPVPQIKQIAGRAGRH-NPNGSKQS 448
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.0 bits (52), Expect = 9.2
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 539 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGR 631
R P R +YRE H + + H R QGR
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGR 351
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,578,847
Number of Sequences: 5004
Number of extensions: 51777
Number of successful extensions: 219
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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