Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00391
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 109 2e-24
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 103 9e-23
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 92 3e-19
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 71 8e-13
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 69 2e-12
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_55671| Best HMM Match : Borrelia_rep (HMM E-Value=0.00026) 29 2.4
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_34310| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_18513| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022) 28 7.4
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 7.4
SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 109 bits (262), Expect = 2e-24
Identities = 53/73 (72%), Positives = 56/73 (76%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIETAGGVM+ LIKRN YSDNQPGVLIQVFEGE +MT NNLLGKFEL
Sbjct: 404 GIETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFEL 463
Query: 475 TGIPPAPRGVPQL 513
TGIPPAPRGVPQ+
Sbjct: 464 TGIPPAPRGVPQI 476
Score = 104 bits (250), Expect = 5e-23
Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 187
DLF+ T EPVE+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINP
Sbjct: 308 DLFKKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINP 367
Query: 188 DEXXXXXXXXXXXILHGDKSE 250
DE ILHGDK +
Sbjct: 368 DEAVAYGAAVQAAILHGDKDD 388
Score = 83.4 bits (197), Expect = 1e-16
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEVTFDIDANGILNVSA++KST KENKITITNDKGRLSKE+IE
Sbjct: 476 IEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIE 518
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 108 bits (259), Expect = 4e-24
Identities = 51/82 (62%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Frame = +2
Query: 8 SADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSIN 184
+A LF+ T+EPVEK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSIN
Sbjct: 399 NAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSIN 458
Query: 185 PDEXXXXXXXXXXXILHGDKSE 250
PDE ILHGDKSE
Sbjct: 459 PDEAVAYGAAVQAAILHGDKSE 480
Score = 103 bits (248), Expect = 9e-23
Identities = 49/73 (67%), Positives = 55/73 (75%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ETAGGVMT IKRN YSDNQ VLIQV+EGE ++TKDNNLLGKFEL
Sbjct: 496 GLETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNLLGKFEL 555
Query: 475 TGIPPAPRGVPQL 513
+GIPPAPRGVPQ+
Sbjct: 556 SGIPPAPRGVPQI 568
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/43 (83%), Positives = 42/43 (97%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
I+VTFD+D+NGILNVSA++KST KENKITITNDKGRLSKE+IE
Sbjct: 568 IDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSKEDIE 610
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 103 bits (248), Expect = 9e-23
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = +2
Query: 11 ADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 190
+DLF S ++PV K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINPD
Sbjct: 308 SDLFLSCLDPVNKALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPD 367
Query: 191 EXXXXXXXXXXXILHGDKSEE 253
E IL GDKS+E
Sbjct: 368 EAVAYGAAVQAAILSGDKSDE 388
Score = 97.5 bits (232), Expect = 8e-21
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIETAG VMT LI+RN YSDNQP V I+VFEGE +TK NNLLGKF+L
Sbjct: 403 GIETAGEVMTKLIERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTKHNNLLGKFDL 462
Query: 475 TGIPPAPRGVPQL 513
+GIPPAPRGVPQ+
Sbjct: 463 SGIPPAPRGVPQI 475
Score = 74.1 bits (174), Expect = 9e-14
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEVTFDIDANGILNVSA +KST K ITITNDKGRLSKEEI+
Sbjct: 475 IEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSKEEID 517
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/79 (53%), Positives = 59/79 (74%)
Frame = +2
Query: 8 SADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 187
+A LF+ST++PV+K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INP
Sbjct: 1003 NAKLFKSTLKPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINP 1062
Query: 188 DEXXXXXXXXXXXILHGDK 244
DE +L G++
Sbjct: 1063 DEAVAYGAAVQAGVLGGEE 1081
Score = 89.8 bits (213), Expect = 2e-18
Identities = 45/73 (61%), Positives = 49/73 (67%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGVMT LI RN +DNQ V IQVFEGE MTKDN+ LGKF+L
Sbjct: 1097 GIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPMTKDNHPLGKFDL 1156
Query: 475 TGIPPAPRGVPQL 513
GIPPAPRGVPQ+
Sbjct: 1157 NGIPPAPRGVPQI 1169
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEVTF+ID NGIL VSA +K T + KITITND+ RL+ E+IE
Sbjct: 1169 IEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLTPEDIE 1211
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 76.6 bits (180), Expect = 2e-14
Identities = 39/73 (53%), Positives = 45/73 (61%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGV T LI RN +D Q V I+VF+GE M DN LLG+F+L
Sbjct: 208 GIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQL 267
Query: 475 TGIPPAPRGVPQL 513
GIPPAPRGVPQ+
Sbjct: 268 VGIPPAPRGVPQV 280
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +2
Query: 11 ADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 190
ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPD
Sbjct: 118 ADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPD 176
Query: 191 EXXXXXXXXXXXILHGD 241
E +L GD
Sbjct: 177 EAVAIGAAIQGGVLAGD 193
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
+EVTFDIDANGI+NVSA +K T +E +I I G LSK+ IE
Sbjct: 280 VEVTFDIDANGIVNVSARDKGTGREQQIVI-QSSGGLSKDAIE 321
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +2
Query: 11 ADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 190
ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPD
Sbjct: 63 ADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPD 121
Query: 191 EXXXXXXXXXXXILHGD 241
E +L GD
Sbjct: 122 EAVAIGAAIQGGVLAGD 138
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGV T LI RN +D Q V I+VF+GE M DN LLG+F+L
Sbjct: 153 GIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 69.3 bits (162), Expect = 2e-12
Identities = 25/59 (42%), Positives = 47/59 (79%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 190
DLF+ ++P+ + L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 341 DLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +2
Query: 68 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 247
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKE 94
Query: 248 EE 253
+
Sbjct: 95 AD 96
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLF PV ++L+ A M I +VLVGG R+PKVQ L EL K+IN DE
Sbjct: 292 DLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +2
Query: 80 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 518 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 625
H +H+ ++ Q+ +Y++ HQ Q H Q+Q+ Q
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQ 326
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -2
Query: 320 MTPPAVSIPRERGVTSSNSRSCPPQTCHRAR*QPGQLHHKLRP 192
M PP + PR +S+ R PP H PG H ++RP
Sbjct: 381 MPPPGATHPRVPSPGASHPRVPPPGAPHPRVPPPGASHQRVRP 423
>SB_55671| Best HMM Match : Borrelia_rep (HMM E-Value=0.00026)
Length = 294
Score = 29.5 bits (63), Expect = 2.4
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = -3
Query: 283 VLHQATADPALLRLVTVQDSS--LDSCTISYGLVRVNRFVELLSIKEIL-QELLHLGDTS 113
+LH +D ALLR + V D + LD +R +LL +++IL +LL+L D S
Sbjct: 42 LLHILVSDLALLRDILVSDLALLLDILVSDLLYLRDMPVSDLLYLRDILVSDLLYLRDMS 101
Query: 112 GATHQY----NIVDLSLIHLGITERLL 44
+ Y ++ DL +HL + +L
Sbjct: 102 VSDLLYLRDMSVSDLLYLHLALLRDIL 128
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 530 RCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRD 634
R QRY + + RE HQ+G HH R S + RD
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 536 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDR 637
QR QR R R+ H+Q ++ QRQR + R R
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQR 69
>SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 494 GAGGIPVSSNLPSKLLSLVIAHSPSNTWM 408
G GG PV+S SKL++ VIA SN+++
Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49
>SB_34310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 384 VGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCY-IKQQQILPSSDLSPC 232
V G+CLS + VTL++C ++++ + C+ K ++ P SD S C
Sbjct: 145 VSGKCLSADVENSQVTLNDC----PATVDADDPACFSYKGSKLRPCSDDSKC 192
>SB_18513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4634
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 471 ADRDPTGAAWRASIEVTFDIDANGIL 548
ADRDP+ A +ASI+V D G+L
Sbjct: 3238 ADRDPSPGALQASIDVVASDDPYGVL 3263
>SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022)
Length = 284
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -1
Query: 477 GQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS 304
GQL T VI+G T + DEY ++ + C G+ S D+ HDT S
Sbjct: 224 GQLSTTINPVIYGVMNKTFR--DEYKRMLCSLSCWCGCGRRGEASFESDDSQHDTRLS 279
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 344 LPSPLNRLRHSPPTLITNP 400
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -3
Query: 274 QATADPALLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLHLGDTSGATHQ 98
Q L ++ VQ +S D C +YG+V + L S +E L+ LHL T T Q
Sbjct: 474 QVLVTSLLSAILAVQVASFD-CAKNYGVVSWLNCLALQSGRESLETTLHLLQTMWETMQ 531
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,247,577
Number of Sequences: 59808
Number of extensions: 447213
Number of successful extensions: 3852
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3844
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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