Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00391
(639 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 114 4e-26
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 114 5e-26
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 113 1e-25
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 111 5e-25
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 110 7e-25
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 109 1e-24
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 96 2e-20
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 96 2e-20
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 96 2e-20
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 94 6e-20
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 76 2e-14
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 72 3e-13
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 71 5e-13
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 71 9e-13
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 59 2e-09
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 59 2e-09
At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 49 2e-06
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 48 7e-06
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 46 3e-05
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 46 3e-05
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 45 4e-05
At1g79580.3 68414.m09279 no apical meristem (NAM) family protein... 31 0.85
At1g79580.2 68414.m09278 no apical meristem (NAM) family protein... 31 0.85
At1g79580.1 68414.m09277 no apical meristem (NAM) family protein... 31 0.85
At3g06480.1 68416.m00750 DEAD box RNA helicase, putative similar... 29 2.0
At2g01730.1 68415.m00101 metallo-beta-lactamase family protein s... 29 2.0
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 28 4.5
At2g31070.1 68415.m03791 TCP family transcription factor, putati... 28 4.5
At1g69570.1 68414.m08001 Dof-type zinc finger domain-containing ... 28 4.5
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 28 6.0
At4g28690.1 68417.m04099 expressed protein 27 7.9
At3g55150.1 68416.m06125 exocyst subunit EXO70 family protein co... 27 7.9
At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family p... 27 7.9
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 27 7.9
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 114 bits (275), Expect = 4e-26
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLFR MEPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE
Sbjct: 314 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDE 373
Query: 194 XXXXXXXXXXXILHGDKSEE 253
IL G+ +E+
Sbjct: 374 AVAYGAAVQAAILSGEGNEK 393
Score = 109 bits (261), Expect = 2e-24
Identities = 52/73 (71%), Positives = 56/73 (76%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ETAGGVMT LI RN YSDNQPGVLIQV+EGE A TKDNNLLGKFEL
Sbjct: 408 GLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFEL 467
Query: 475 TGIPPAPRGVPQL 513
+GIPPAPRGVPQ+
Sbjct: 468 SGIPPAPRGVPQI 480
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
I V FDIDANGILNVSA +K+T ++NKITITNDKGRLSKEEIE
Sbjct: 480 ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIE 522
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 114 bits (274), Expect = 5e-26
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLFR MEPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE
Sbjct: 314 DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDE 373
Query: 194 XXXXXXXXXXXILHGDKSEE 253
IL G+ +E+
Sbjct: 374 AVAYGAAVQGAILSGEGNEK 393
Score = 111 bits (266), Expect = 5e-25
Identities = 53/73 (72%), Positives = 57/73 (78%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ETAGGVMTTLI RN YSDNQPGVLIQV+EGE A TKDNNLLGKFEL
Sbjct: 408 GLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFEL 467
Query: 475 TGIPPAPRGVPQL 513
+GIPPAPRGVPQ+
Sbjct: 468 SGIPPAPRGVPQI 480
Score = 71.7 bits (168), Expect = 4e-13
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
I V FDIDANGILNVSA +K+T ++NKITITNDKGRLSK+EIE
Sbjct: 480 ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIE 522
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 113 bits (271), Expect = 1e-25
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLFR MEPVEK LRDAKMDK+ +H+IVLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE
Sbjct: 314 DLFRKCMEPVEKCLRDAKMDKSTVHEIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDE 373
Query: 194 XXXXXXXXXXXILHGDKSEE 253
IL G+ +E+
Sbjct: 374 AVAYGAAVQAAILSGEGNEK 393
Score = 113 bits (271), Expect = 1e-25
Identities = 54/73 (73%), Positives = 58/73 (79%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ETAGGVMTTLI+RN YSDNQPGVLIQVFEGE A TKDNNLLGKFEL
Sbjct: 408 GLETAGGVMTTLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFEL 467
Query: 475 TGIPPAPRGVPQL 513
+GIPPAPRGVPQ+
Sbjct: 468 SGIPPAPRGVPQI 480
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
I V FDIDANGILNVSA +K+T K+NKITITNDKGRLSKE+IE
Sbjct: 480 ITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEDIE 522
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 111 bits (266), Expect = 5e-25
Identities = 52/80 (65%), Positives = 62/80 (77%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLFR M+PVEK L+DAK+DK+ +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 313 DLFRKCMDPVEKVLKDAKLDKSSVHDVVLVGGSTRIPKIQQLLQDFFNGKELCKSINPDE 372
Query: 194 XXXXXXXXXXXILHGDKSEE 253
IL G+ SE+
Sbjct: 373 AVAYGAAVQAAILTGEGSEK 392
Score = 103 bits (247), Expect = 1e-22
Identities = 49/73 (67%), Positives = 54/73 (73%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ETAGGVMT LI RN Y+DNQPGVLIQV+EGE A T+DNNLLG FEL
Sbjct: 407 GLETAGGVMTVLIPRNTTVPCKKEQVFSTYADNQPGVLIQVYEGERARTRDNNLLGTFEL 466
Query: 475 TGIPPAPRGVPQL 513
GIPPAPRGVPQ+
Sbjct: 467 KGIPPAPRGVPQI 479
Score = 68.5 bits (160), Expect = 3e-12
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
I V FDIDANGILNVSA +K+ +N+ITITNDKGRLSKEEIE
Sbjct: 479 INVCFDIDANGILNVSAEDKTAGVKNQITITNDKGRLSKEEIE 521
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 110 bits (265), Expect = 7e-25
Identities = 53/80 (66%), Positives = 61/80 (76%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLFR MEPV K LRD+KMDK+ +HD+VLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE
Sbjct: 314 DLFRKCMEPVMKCLRDSKMDKSMVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDE 373
Query: 194 XXXXXXXXXXXILHGDKSEE 253
IL G+ +E+
Sbjct: 374 AVAYGAAVQAAILSGEGNEK 393
Score = 92.3 bits (219), Expect = 2e-19
Identities = 45/72 (62%), Positives = 51/72 (70%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGVMTTLI+RN DNQP VLIQV+EGE A T DNN+LG+F L
Sbjct: 408 GIETIGGVMTTLIQRNTTIPAKKEQEFTTTVDNQPDVLIQVYEGERARTIDNNILGQFVL 467
Query: 475 TGIPPAPRGVPQ 510
+GIPPAPRG+PQ
Sbjct: 468 SGIPPAPRGIPQ 479
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +3
Query: 516 VTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
V FDID+NGILNVSA +K+T K+NKITITNDKGRLSK++IE
Sbjct: 482 VCFDIDSNGILNVSAEDKATGKKNKITITNDKGRLSKDDIE 522
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 109 bits (263), Expect = 1e-24
Identities = 52/73 (71%), Positives = 57/73 (78%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ETAGGVMT LI+RN YSDNQPGVLIQV+EGE A TKDNNLLGKFEL
Sbjct: 408 GLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFEL 467
Query: 475 TGIPPAPRGVPQL 513
+GIPPAPRGVPQ+
Sbjct: 468 SGIPPAPRGVPQI 480
Score = 107 bits (257), Expect = 6e-24
Identities = 54/80 (67%), Positives = 59/80 (73%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLFR MEPVEK LRDAKMDK I D+VLVGGSTRIPKVQ+LL DFFNGKEL KSINPDE
Sbjct: 314 DLFRKCMEPVEKCLRDAKMDKNSIDDVVLVGGSTRIPKVQQLLVDFFNGKELCKSINPDE 373
Query: 194 XXXXXXXXXXXILHGDKSEE 253
IL G+ +E+
Sbjct: 374 AVAYGAAVQAAILSGEGNEK 393
Score = 71.7 bits (168), Expect = 4e-13
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
I V FDIDANGILNVSA +K+T ++NKITITNDKGRLSK+EIE
Sbjct: 480 ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIE 522
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/80 (57%), Positives = 57/80 (71%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLFR TM PV+K++ DA + K+QI +IVLVGGSTRIPKVQ+LL+DFF GKE NK +NPDE
Sbjct: 339 DLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDE 398
Query: 194 XXXXXXXXXXXILHGDKSEE 253
IL G+ +E
Sbjct: 399 AVAYGAAVQGGILSGEGGDE 418
Score = 88.6 bits (210), Expect = 3e-18
Identities = 43/73 (58%), Positives = 48/73 (65%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGVMT LI RN Y D Q V IQVFEGE ++TKD LLGKF+L
Sbjct: 433 GIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDL 492
Query: 475 TGIPPAPRGVPQL 513
TG+PPAPRG PQ+
Sbjct: 493 TGVPPAPRGTPQI 505
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/80 (57%), Positives = 57/80 (71%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLFR TM PV+K++ DA + K+QI +IVLVGGSTRIPKVQ+LL+DFF GKE NK +NPDE
Sbjct: 339 DLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDE 398
Query: 194 XXXXXXXXXXXILHGDKSEE 253
IL G+ +E
Sbjct: 399 AVAYGAAVQGGILSGEGGDE 418
Score = 88.6 bits (210), Expect = 3e-18
Identities = 43/73 (58%), Positives = 48/73 (65%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGVMT LI RN Y D Q V IQVFEGE ++TKD LLGKF+L
Sbjct: 433 GIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDL 492
Query: 475 TGIPPAPRGVPQL 513
TG+PPAPRG PQ+
Sbjct: 493 TGVPPAPRGTPQI 505
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEVTF++DANGILNV A +K++ K KITITN+KGRLS+EEI+
Sbjct: 505 IEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEID 547
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/80 (57%), Positives = 57/80 (71%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLFR TM PV+K++ DA + K+QI +IVLVGGSTRIPKVQ+LL+DFF GKE NK +NPDE
Sbjct: 339 DLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDE 398
Query: 194 XXXXXXXXXXXILHGDKSEE 253
IL G+ +E
Sbjct: 399 AVAYGAAVQGGILSGEGGDE 418
Score = 87.0 bits (206), Expect = 9e-18
Identities = 43/73 (58%), Positives = 47/73 (64%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGVMT LI RN Y D Q V IQVFEGE ++TKD LLGKF+L
Sbjct: 433 GIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDL 492
Query: 475 TGIPPAPRGVPQL 513
GIPPAPRG PQ+
Sbjct: 493 NGIPPAPRGTPQI 505
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEVTF++DANGILNV A +K++ K KITITN+KGRLS+EEI+
Sbjct: 505 IEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEID 547
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 94.3 bits (224), Expect = 6e-20
Identities = 44/80 (55%), Positives = 58/80 (72%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DLF+ TMEPV+K+L+DA + K+ I +IVLVGGSTRIPKVQ++L+DFF+GKE +K NPDE
Sbjct: 353 DLFKKTMEPVKKALKDAGLKKSDIDEIVLVGGSTRIPKVQQMLKDFFDGKEPSKGTNPDE 412
Query: 194 XXXXXXXXXXXILHGDKSEE 253
+L G+ EE
Sbjct: 413 AVAYGAAVQGGVLSGEGGEE 432
Score = 85.4 bits (202), Expect = 3e-17
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGVMT +I RN Y D Q V I V+EGE +MTKDN LGKF+L
Sbjct: 447 GIETVGGVMTNIIPRNTVIPTKKSQVFTTYQDQQTTVTINVYEGERSMTKDNRELGKFDL 506
Query: 475 TGIPPAPRGVPQL 513
TGI PAPRGVPQ+
Sbjct: 507 TGILPAPRGVPQI 519
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEVTF++DANGIL V A +K ITITNDKGRL++EEIE
Sbjct: 519 IEVTFEVDANGILQVKAEDKVAKTSQSITITNDKGRLTEEEIE 561
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/73 (52%), Positives = 45/73 (61%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET GGV T LI RN +DNQ V I+V +GE M DN LLG+F+L
Sbjct: 449 GIETLGGVFTRLITRNTTIPTKKSQVFSTAADNQTQVGIRVLQGEREMATDNKLLGEFDL 508
Query: 475 TGIPPAPRGVPQL 513
GIPP+PRGVPQ+
Sbjct: 509 VGIPPSPRGVPQI 521
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +2
Query: 17 LFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEX 196
L T +P + L+DA + ++ +++LVGG TR+PKVQ ++ + F GK +K +NPDE
Sbjct: 361 LIERTRDPCKNCLKDAGISAKEVDEVLLVGGMTRVPKVQSIVAEIF-GKSPSKGVNPDEA 419
Query: 197 XXXXXXXXXXILHGDKSE 250
IL GD E
Sbjct: 420 VAMGAALQGGILRGDVKE 437
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
IEVTFDIDANGI+ VSA +K+T K +ITI G LS+++I+
Sbjct: 521 IEVTFDIDANGIVTVSAKDKTTGKVQQITI-RSSGGLSEDDIQ 562
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 72.1 bits (169), Expect = 3e-13
Identities = 36/73 (49%), Positives = 44/73 (60%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
GIET G V T LI RN +DNQ V I+V +GE M DN +LG+F+L
Sbjct: 444 GIETLGAVFTKLIPRNTTIPTKKSQVFSTAADNQMQVGIKVLQGEREMAADNKVLGEFDL 503
Query: 475 TGIPPAPRGVPQL 513
GIPPAPRG+PQ+
Sbjct: 504 VGIPPAPRGMPQI 516
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +2
Query: 2 GTSADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSI 181
G L T P + L+DA + ++ +++LVGG TR+PKVQ+++ + F GK K +
Sbjct: 351 GLVGKLIERTRSPCQNCLKDAGVTIKEVDEVLLVGGMTRVPKVQEIVSEIF-GKSPCKGV 409
Query: 182 NPDEXXXXXXXXXXXILHGD 241
NPDE IL GD
Sbjct: 410 NPDEAVAMGAAIQGGILRGD 429
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 510 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEI 635
IEVTFDIDANGI VSA +K+T KE ITI G LS +EI
Sbjct: 516 IEVTFDIDANGITTVSAKDKATGKEQNITI-RSSGGLSDDEI 556
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 71.3 bits (167), Expect = 5e-13
Identities = 35/73 (47%), Positives = 41/73 (56%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ET GGVMT +I RN +D Q V I V +GE +DN LG F L
Sbjct: 471 GLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRL 530
Query: 475 TGIPPAPRGVPQL 513
GIPPAPRGVPQ+
Sbjct: 531 DGIPPAPRGVPQI 543
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +2
Query: 11 ADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 190
+DL PVE SLRDAK+ I +++LVGGSTRIP VQ+L++ GKE N ++NPD
Sbjct: 381 SDLLDRVRTPVENSLRDAKLSFKDIDEVILVGGSTRIPAVQELVRK-VTGKEPNVTVNPD 439
Query: 191 EXXXXXXXXXXXILHGDKSE 250
E +L GD S+
Sbjct: 440 EVVALGAAVQAGVLAGDVSD 459
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/57 (49%), Positives = 35/57 (61%)
Frame = +3
Query: 468 RADRDPTGAAWRASIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
R D P IEV FDIDANGIL+VSA++K T K+ ITIT L K+E++
Sbjct: 529 RLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITG-ASTLPKDEVD 584
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 70.5 bits (165), Expect = 9e-13
Identities = 34/73 (46%), Positives = 41/73 (56%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ET GGVMT +I RN +D Q V I V +GE +DN +G F L
Sbjct: 471 GLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSIGSFRL 530
Query: 475 TGIPPAPRGVPQL 513
GIPPAPRGVPQ+
Sbjct: 531 DGIPPAPRGVPQI 543
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/80 (46%), Positives = 47/80 (58%)
Frame = +2
Query: 11 ADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 190
+DL PVE SLRDAK+ I +++LVGGSTRIP VQ L++ GKE N S+NPD
Sbjct: 381 SDLLDRVRTPVENSLRDAKLSFKDIDEVILVGGSTRIPAVQDLVRK-LTGKEPNVSVNPD 439
Query: 191 EXXXXXXXXXXXILHGDKSE 250
E +L GD S+
Sbjct: 440 EVVALGAAVQAGVLSGDVSD 459
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = +3
Query: 468 RADRDPTGAAWRASIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 638
R D P IEV FDIDANGIL+VSA +K T K+ ITIT L K+E++
Sbjct: 529 RLDGIPPAPRGVPQIEVKFDIDANGILSVSASDKGTGKKQDITITG-ASTLPKDEVD 584
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ G +I RN DNQ LI ++EGE ++N+LLG F+L
Sbjct: 425 GVRANGNKFIPVIPRNTMVPARKDLFFTTVQDNQKEALIIIYEGEGETVEENHLLGYFKL 484
Query: 475 TGIPPAPRGVPQL 513
GIPPAP+GVP++
Sbjct: 485 VGIPPAPKGVPEI 497
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +2
Query: 17 LFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
+F V + LRDA+++ I D+++VGG + IPKV+ ++++ E+ K +NP E
Sbjct: 331 VFEECERLVVQCLRDARVNGGDIDDLIMVGGCSYIPKVRTIIKNVCKKDEIYKGVNPLE 389
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 295 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGECAMTKDNNLLGKFEL 474
G+ G +I RN DNQ LI ++EGE ++N+LLG F+L
Sbjct: 425 GVRANGNKFIPVIPRNTMVPARKDLFFTTVQDNQKEALIIIYEGEGETVEENHLLGYFKL 484
Query: 475 TGIPPAPRGVPQL 513
GIPPAP+GVP++
Sbjct: 485 VGIPPAPKGVPEI 497
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +2
Query: 17 LFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
+F V + LRDA+++ I D+++VGG + IPKV+ ++++ E+ K +NP E
Sbjct: 331 VFEECERLVVQCLRDARVNGGDIDDLIMVGGCSYIPKVRTIIKNVCKKDEIYKGVNPLE 389
>At1g11660.1 68414.m01339 heat shock protein, putative strong
similarity to gb|Z70314 heat-shock protein from
Arabidopsis thaliana and is a member of the PF|00012
Hsp70 protein family
Length = 773
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2
Query: 8 SADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 187
SA L + P +K+L D+ + QIH + LVG +RIP + K+L F +EL +++N
Sbjct: 308 SAGLLERLIVPCQKALADSGLSLDQIHSVELVGSGSRIPAISKMLSSLFK-RELGRTVNA 366
Query: 188 DE 193
E
Sbjct: 367 SE 368
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/60 (31%), Positives = 39/60 (65%)
Frame = +2
Query: 14 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 193
DL+ ++ P++ L+ + + I + L+GG+TR+PK+Q +Q+F ++L+K ++ DE
Sbjct: 346 DLWERSLTPLKDVLKHSGLKIDDISAVELIGGATRVPKLQSTIQEFIGKQQLDKHLDADE 405
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +2
Query: 8 SADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 187
S + P+EK+L DA + +H + +VG +R+P + K+L +FF GKE +++N
Sbjct: 307 SIPILERVKRPLEKALSDAGLTVEDVHMVEVVGSGSRVPAMIKILTEFF-GKEPRRTMNA 365
Query: 188 DE 193
E
Sbjct: 366 SE 367
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +2
Query: 8 SADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 187
S + P+EK+L DA + +H + +VG +R+P + K+L +FF GKE +++N
Sbjct: 307 SIPILERVKRPLEKALSDAGLTVEDVHMVEVVGSGSRVPAMIKILTEFF-GKEPRRTMNA 365
Query: 188 DE 193
E
Sbjct: 366 SE 367
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +2
Query: 8 SADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 187
S + P+EK+L DA + +H + ++G +R+P + K+L +FF GKE +++N
Sbjct: 307 SIPILERVKRPLEKALSDAGLTVEDVHMVEVIGSGSRVPAMIKILTEFF-GKEPRRTMNA 365
Query: 188 DE 193
E
Sbjct: 366 SE 367
>At1g79580.3 68414.m09279 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 30.7 bits (66), Expect = 0.85
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 533 CQRYPQRFRYREVHQQGEQDHHYQRQ 610
C+ + ++ +R HQ+ EQDHH+ Q
Sbjct: 161 CRVFKKKNHFRGFHQEQEQDHHHHHQ 186
>At1g79580.2 68414.m09278 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 30.7 bits (66), Expect = 0.85
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 533 CQRYPQRFRYREVHQQGEQDHHYQRQ 610
C+ + ++ +R HQ+ EQDHH+ Q
Sbjct: 161 CRVFKKKNHFRGFHQEQEQDHHHHHQ 186
>At1g79580.1 68414.m09277 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 30.7 bits (66), Expect = 0.85
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 533 CQRYPQRFRYREVHQQGEQDHHYQRQ 610
C+ + ++ +R HQ+ EQDHH+ Q
Sbjct: 161 CRVFKKKNHFRGFHQEQEQDHHHHHQ 186
>At3g06480.1 68416.m00750 DEAD box RNA helicase, putative similar to
RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF00397:
WW domain
Length = 1088
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 374 SPPTLITNPEYSSKYLRVSVL*PKITTCSVNSS*PGSHRRRVACLN*GHL--RHRCQRYP 547
+P T +T E S S PK+ V SS G + GH+ +H Q+ P
Sbjct: 41 NPETNVTQYERPSAPPPHSATTPKLAQIPVPSSGQGHQAQHEQAKPVGHVSQQHGFQQQP 100
Query: 548 QRFRYREVHQQGEQDHHYQR 607
Q+F + V Q Q H Q+
Sbjct: 101 QQFPSQHVRPQMMQQHPAQQ 120
>At2g01730.1 68415.m00101 metallo-beta-lactamase family protein
simliar to SP|P79101 Cleavage and polyadenylation
specificity factor, 73 kDa subunit (CPSF 73 kDa subunit)
{Bos taurus}; contains Pfam profile PF00753:
Metallo-beta-lactamase superfamily
Length = 613
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 429 LTLKYLDEYSGLVIRVGGECLSLFSGDGSVTL-DECGHDTSSS 304
L+ K L SG I CL + S GS+ L D+C H +SSS
Sbjct: 541 LSAKILKTVSGAQIHESENCLQVASFKGSLCLKDKCMHRSSSS 583
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 488 GGIPVSSNLPSKLLSLVIAHSPSNTWMSTPG 396
GG+ +S+N P + ++ PSN+W S PG
Sbjct: 187 GGLHISTNQPGPSVPQ-LSSLPSNSWQSRPG 216
>At2g31070.1 68415.m03791 TCP family transcription factor, putative
similar to TCP1 protein (GI:20269127) {Lupinus albus}
and cycloidea (GI:12002867) [Lycopersicon esculentum]
Length = 361
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 542 YPQRFRYREVHQQGEQDHHYQRQRSSL 622
+P FR + HQ HH+Q Q SS+
Sbjct: 289 FPHSFRSWDHHQTTSDHHHHQNQASSM 315
>At1g69570.1 68414.m08001 Dof-type zinc finger domain-containing
protein nearly identical to H-protein promoter binding
factor-2b (Arabidopsis thaliana) GI:3386548
Length = 399
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 146 LAGASAPWGYEWSHPPVQYRGFEPYPSWHHGETSPLAP 33
L S+PW Y+WS P F P P ++ G T P+ P
Sbjct: 255 LPNNSSPWPYQWS-PTGPNASFYPVP-FYWGCTVPIYP 290
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 253 LLRLVTVQDSSLD-SCTISYGLVRVNRFVELLSIKEILQELLHLG 122
LL L D SLD S ++Y R+N FV + + I Q LH+G
Sbjct: 212 LLALAGKLDKSLDVSGEVTYNGYRLNEFVPIKTSAYISQNDLHVG 256
>At4g28690.1 68417.m04099 expressed protein
Length = 448
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 446 ITTCSVNSS*PGSHRRRVACLN*GHLRHRCQRYP 547
I TC + + VAC + H RH C +YP
Sbjct: 73 IETCETDGVLVVGQKGEVACRDFPHPRHACAKYP 106
>At3g55150.1 68416.m06125 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit; tomato leucine zipper-containing protein,
Lycopersicon esculentum, PIR:S21495
Length = 636
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 492 RRWDPGQLEFTEQVVIFGHS 433
R+WDP FT+ V +F HS
Sbjct: 54 RKWDPNTPSFTKIVSLFNHS 73
>At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family
protein contains Pfam profile PF03134: TB2/DP1, HVA22
family
Length = 158
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 36 SQWRSLSVMPRWIRLKSTILYWWVAPLVS 122
S WR L+ +P W LK W V P+ S
Sbjct: 59 SVWRVLAWLPFWPYLKLLFCMWLVLPMFS 87
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 521 LRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSS 619
L+H Q+ Q+ + ++ HQ + HH+Q+Q+ +
Sbjct: 737 LQHHQQQQQQQQQQQQQHQLTQLQHHHQQQQQA 769
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,057,410
Number of Sequences: 28952
Number of extensions: 298030
Number of successful extensions: 1053
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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