Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00390
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 106 8e-23
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 106 8e-23
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 106 8e-23
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 106 8e-23
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 106 8e-23
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 103 7e-22
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 54 3e-07
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 106 bits (254), Expect = 8e-23
Identities = 47/77 (61%), Positives = 60/77 (77%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 103 bits (246), Expect = 7e-22
Identities = 46/77 (59%), Positives = 59/77 (76%)
Frame = +3
Query: 24 WFNPASSTIPQKAK*NKES*AVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAA 203
WFN + I ++ ++ +APRPA+GP+RPIVRC TVRYHTKVRAGRGF+L E+R A
Sbjct: 25 WFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVRYHTKVRAGRGFSLEELRVA 84
Query: 204 GLNPVFARTIGIAVDPR 254
G++ ARTIGI+VDPR
Sbjct: 85 GIHKKVARTIGISVDPR 101
Score = 101 bits (243), Expect = 2e-21
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 RNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 433
RNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 103 RNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYK 162
Query: 434 KSVARPITEDEKNFKAYQYLRGARS 508
K AR ITE+EKNFKA+ LR AR+
Sbjct: 163 KEKARVITEEEKNFKAFASLRMARA 187
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 4 WQRFVKTGLTQPARRYRRKQNRIKKAR 84
WQR V T QPAR+ RR++ R KAR
Sbjct: 18 WQRRVATWFNQPARKIRRRKARQAKAR 44
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 54.4 bits (125), Expect = 3e-07
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +2
Query: 380 KLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARS 508
KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARA 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,976,559
Number of Sequences: 237096
Number of extensions: 1779982
Number of successful extensions: 4242
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4227
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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