Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00390
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.3  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   4.3  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 475 QSLSIPERSSLLAKLVGIRAKRLKDAAENPDDVT 576
           Q+L +  + + L + V    KRL+DA ++ + +T
Sbjct: 328 QNLQLQSQRNQLIQYVATLEKRLRDAIDSGNVIT 361


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 89  SSTSCSWAVTSY 124
           S + C+W +TSY
Sbjct: 66  SGSKCTWTITSY 77


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 21  NWFNPASSTIP 53
           NW  PAS TIP
Sbjct: 547 NWIYPASMTIP 557


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,170
Number of Sequences: 438
Number of extensions: 3424
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)