Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00383
(477 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 128 2e-30
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 123 7e-29
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 7e-29
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 121 4e-28
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 109 1e-24
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 93 1e-19
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 63 1e-10
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 4e-10
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 7e-10
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 7e-06
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 43 1e-04
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 3e-04
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 40 0.001
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 38 0.003
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 38 0.003
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 37 0.010
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.21
SB_56185| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 27 7.9
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 128 bits (310), Expect = 2e-30
Identities = 57/66 (86%), Positives = 60/66 (90%)
Frame = +1
Query: 55 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 234
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 235 NEASGG 252
NEA+GG
Sbjct: 265 NEATGG 270
Score = 109 bits (262), Expect = 1e-24
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYT
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 320
Score = 53.6 bits (123), Expect = 8e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAELVDSVL+VVRKEAESCDCLQG
Sbjct: 321 EGAELVDSVLDVVRKEAESCDCLQG 345
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 123 bits (297), Expect = 7e-29
Identities = 53/57 (92%), Positives = 55/57 (96%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 57
Score = 109 bits (263), Expect = 9e-25
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYT
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Score = 53.6 bits (123), Expect = 8e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAELVDSVL+VVRKEAESCDCLQG
Sbjct: 108 EGAELVDSVLDVVRKEAESCDCLQG 132
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 123 bits (297), Expect = 7e-29
Identities = 53/57 (92%), Positives = 55/57 (96%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 57
Score = 77.0 bits (181), Expect = 7e-15
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 356
+YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 121 bits (291), Expect = 4e-28
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 57
Score = 107 bits (258), Expect = 3e-24
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPR++L+DLEPGTMDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYT
Sbjct: 58 KYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Score = 51.6 bits (118), Expect = 3e-07
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAEL+DSVL+VVRKEAESCDC+QG
Sbjct: 108 EGAELMDSVLDVVRKEAESCDCIQG 132
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 109 bits (262), Expect = 1e-24
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYT
Sbjct: 3 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 52
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAELVDSVL+VVRKEAESCDC+QG
Sbjct: 53 EGAELVDSVLDVVRKEAESCDCIQG 77
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 92.7 bits (220), Expect = 1e-19
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+
Sbjct: 14 RYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYS 63
Score = 46.8 bits (106), Expect = 9e-06
Identities = 17/25 (68%), Positives = 24/25 (96%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAEL+D++ +V+RKEAE+CDC+QG
Sbjct: 64 EGAELIDNIFDVLRKEAENCDCMQG 88
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 62.9 bits (146), Expect = 1e-10
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP +D +R+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 478 KHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYT 527
Score = 60.5 bits (140), Expect = 7e-10
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ DLEP +D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 45 KHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 94
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E G
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 477
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +1
Query: 127 IGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
+G WE+ EHGI P G D + + N +++E G
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 44
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G + +D+VL+ +RK A+ C LQG
Sbjct: 529 GKDHIDNVLDRIRKLADQCSGLQG 552
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 62.9 bits (146), Expect = 1e-10
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP +D VR+G + Q+F P+ V + A NN+A+GHYT
Sbjct: 60 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYT 109
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 493 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 542
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 59
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
RE + I GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 492
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E+VD VL+ +RK A+ C LQG
Sbjct: 111 GKEIVDLVLDRIRKLADQCTGLQG 134
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E+VD VL+ +RK A+ C LQG
Sbjct: 544 GKEIVDLVLDRIRKLADQCTGLQG 567
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 59 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 108
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
RE + I GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 58
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D VL+ +RK A+ C LQG
Sbjct: 110 GKEIIDLVLDRIRKLADQCTGLQG 133
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 431 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 480
Score = 60.9 bits (141), Expect = 5e-10
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ DLEP +D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 864 KHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 913
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E G
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAG 430
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E G
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 863
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D VL+ +RK A+ C LQG
Sbjct: 915 GKEMIDLVLDRIRKLADQCTGLQG 938
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 124 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 173
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 645 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 694
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 644
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
RE + I GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 571
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 123
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D VL+ +RK A+ C LQG
Sbjct: 696 GKELIDLVLDRIRKLADQCTGLQG 719
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E+VD VL+ +RK A+ C LQG
Sbjct: 175 GKEIVDLVLDRIRKLADQCTGLQG 198
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 60 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 59
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRA+LVDLEP +D VR+G + ++ P+ + + A NN+A+GHYT
Sbjct: 971 KYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYT 1020
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 61.3 bits (142), Expect = 4e-10
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP +D +R+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 25 KHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYT 74
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 60.5 bits (140), Expect = 7e-10
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ DLEP +D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 60 KHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSG 59
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGG 252
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GG
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGG 59
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 139 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 240
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 249
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 250 G 252
G
Sbjct: 254 G 254
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
MRE + I GQ G QIG WE+ EHGI P G D + N +++E G
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAG 59
Score = 35.9 bits (79), Expect = 0.017
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA+ VDLEP + P+ + + A NN+A+GHYT
Sbjct: 60 KHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYT 99
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 41.9 bits (94), Expect = 3e-04
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 300 DSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
D VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 46
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D VL+ +RK A+ C LQG
Sbjct: 48 GKELIDLVLDRIRKLADQCTGLQG 71
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.5 bits (93), Expect = 3e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 264 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNW 383
RA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 306 VRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYT 34
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D VL+ +RK A+ C LQG
Sbjct: 36 GKELIDLVLDRIRKLADQCTGLQG 59
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 306 VRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
VR+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYT 34
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 306 VRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
VR G + +F PD + + A NN+A+GHYT
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYT 34
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 38.3 bits (85), Expect = 0.003
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 306 VRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+R+G + Q+F P+ + + A NN+A+GHYT
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYT 34
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 36.7 bits (81), Expect = 0.010
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAEL+DS ++ +RK AE+CD +QG
Sbjct: 16 EGAELMDSGMDCIRKLAENCDTVQG 40
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 360 QSGAGNNWAKGHYT 401
Q+ A NNWAKG YT
Sbjct: 2 QNSAANNWAKGFYT 15
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.21
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 91 IVHIQAGQCGNQIGAKFWEIISDE 162
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_56185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -3
Query: 373 PAPDCXKTKLSGRKICPKGPERTESMVPGSKSTRMARGTYCRRRLH-CSIH*CAPTASQS 197
P P + + R + +GP + GS++T G +RR+H C C ++S
Sbjct: 139 PVPSIVVQQRASRPVS-RGPRSKSTSNTGSRATSPKDGAESKRRVHRCQFSGCRKVYTKS 197
Query: 196 PH 191
H
Sbjct: 198 SH 199
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 382 QLLPAPDCXKTKLSGRKICPKGPERTESMVPGSKSTR 272
Q +PA KT LS R+ K E+T S PG+++TR
Sbjct: 50 QEVPANRLIKTPLSRRE-STKPTEKTGSQTPGNRNTR 85
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 237 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 136
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 398 VVSLGPVVAGAGLSEDEVVRTEDLSERSRAXRVHGAGL 285
V++L PV+ G +++D V + RSR R H G+
Sbjct: 230 VIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRHRCGI 267
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,930,317
Number of Sequences: 59808
Number of extensions: 274443
Number of successful extensions: 697
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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