Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00383
(477 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 125 1e-29
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 115 2e-26
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 113 8e-26
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 113 8e-26
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 108 2e-24
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 108 2e-24
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 85 2e-17
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 85 2e-17
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 66 9e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 62 3e-10
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 62 3e-10
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 62 3e-10
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 62 3e-10
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 61 3e-10
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 61 3e-10
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 61 5e-10
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 61 5e-10
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 61 5e-10
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 61 5e-10
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 60 1e-09
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 51 4e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 51 4e-07
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 51 5e-07
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81048-7|CAC42273.1| 207|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z81048-6|CAB02838.1| 197|Caenorhabditis elegans Hypothetical pr... 27 5.3
Y17255-1|CAB41945.1| 197|Caenorhabditis elegans SMN protein pro... 27 5.3
AF156887-1|AAF00192.1| 207|Caenorhabditis elegans survival moto... 27 5.3
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 27 7.0
AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical ... 27 7.0
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 27 7.0
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 125 bits (302), Expect = 1e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGG
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGG 57
Score = 105 bits (253), Expect = 1e-23
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVF QSGAGNNWAKGHYT
Sbjct: 58 KYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAELVD+VL+VVRKEAESCDCLQG
Sbjct: 108 EGAELVDNVLDVVRKEAESCDCLQG 132
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 115 bits (276), Expect = 2e-26
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GG
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGG 57
Score = 108 bits (260), Expect = 2e-24
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVF QSGAGNNWAKGHYT
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAELVD+VL+VVRKEAE CDCLQG
Sbjct: 108 EGAELVDNVLDVVRKEAEGCDCLQG 132
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 113 bits (271), Expect = 8e-26
Identities = 51/58 (87%), Positives = 54/58 (93%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGN 255
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA G N
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA-GSN 57
Score = 107 bits (257), Expect = 4e-24
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VF QSGAGNNWAKGHYT
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYT 107
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAELVD+VL+VVRKEAES DCLQG
Sbjct: 108 EGAELVDNVLDVVRKEAESTDCLQG 132
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 113 bits (271), Expect = 8e-26
Identities = 51/58 (87%), Positives = 54/58 (93%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGN 255
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA G N
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA-GSN 57
Score = 107 bits (257), Expect = 4e-24
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VF QSGAGNNWAKGHYT
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYT 107
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAELVD+VL+VVRKEAES DCLQG
Sbjct: 108 EGAELVDNVLDVVRKEAESTDCLQG 132
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 108 bits (260), Expect = 2e-24
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVF QSGAGNNWAKGHYT
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
Score = 107 bits (258), Expect = 3e-24
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNG 57
Score = 50.4 bits (115), Expect = 7e-07
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAELVD+VL+V+RKEAE CDCLQG
Sbjct: 108 EGAELVDNVLDVIRKEAEGCDCLQG 132
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 108 bits (260), Expect = 2e-24
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVF QSGAGNNWAKGHYT
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
Score = 106 bits (255), Expect = 7e-24
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNG 57
Score = 50.4 bits (115), Expect = 7e-07
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
EGAELVD+VL+V+RKEAE CDCLQG
Sbjct: 108 EGAELVDNVLDVIRKEAEGCDCLQG 132
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASG 249
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 70.9 bits (166), Expect = 4e-13
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = +3
Query: 249 RQYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHY 398
R+YVPRAILVDL+P +++ VRS +G++F P+N V +SGAGNNW++G+Y
Sbjct: 57 RKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYY 106
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
+GAE+VD VL V+R+EAE+ D L+G
Sbjct: 108 QGAEIVDKVLSVIRREAEAADSLEG 132
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASG 249
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 70.9 bits (166), Expect = 4e-13
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = +3
Query: 249 RQYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHY 398
R+YVPRAILVDL+P +++ VRS +G++F P+N V +SGAGNNW++G+Y
Sbjct: 57 RKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYY 106
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 401 EGAELVDSVLEVVRKEAESCDCLQG 475
+GAE+VD VL V+R+EAE+ D L+G
Sbjct: 108 QGAEIVDKVLSVIRREAEAADSLEG 132
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 66.5 bits (155), Expect = 9e-12
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +3
Query: 222 QCILQ*SLRRQYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
Q S+ ++VPRAI VDLEP +D +R+G +G +F PD + + A NN+A+GHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGG 252
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNG 62
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D VL+ +RK+ E+C+ LQG
Sbjct: 114 GKELIDVVLDRIRKQTENCEGLQG 137
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRAI VDLEP +D VR+G + ++F P+ + + A NN+A+GHYT
Sbjct: 60 KHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYT 109
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 252
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E G
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSG 59
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D V++ VR+ E C LQG
Sbjct: 111 GKELIDVVMDRVRRLTERCQSLQG 134
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 61.7 bits (143), Expect = 3e-10
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPR+I VDLEP +D +R+G + ++F P+ + + A NN+A+GHYT
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSG 57
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D+VL+ +R+ A++C LQG
Sbjct: 109 GKELIDTVLDRIRRLADNCSGLQG 132
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 61.7 bits (143), Expect = 3e-10
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPR+I VDLEP +D +R+G + ++F P+ + + A NN+A+GHYT
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNG 57
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D+VL+ +R+ A++C LQG
Sbjct: 109 GKELIDTVLDRIRRLADNCSGLQG 132
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 61.7 bits (143), Expect = 3e-10
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPR+I VDLEP +D +R+G + ++F P+ + + A NN+A+GHYT
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNG 57
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D+VL+ +R+ A++C LQG
Sbjct: 109 GKELIDTVLDRIRRLADNCSGLQG 132
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 61.7 bits (143), Expect = 3e-10
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPR+I VDLEP +D +R+G + ++F P+ + + A NN+A+GHYT
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSG 57
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D+VL+ +R+ A++C LQG
Sbjct: 109 GKELIDTVLDRIRRLADNCSGLQG 132
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 61.3 bits (142), Expect = 3e-10
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPR+I VDLEP +D +R+G + ++F P+ + + A NN+A+GHYT
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 44.8 bits (101), Expect = 3e-05
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNG 57
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D+ L+ +R+ A++C LQG
Sbjct: 109 GKELIDTTLDRIRRLADNCSGLQG 132
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 61.3 bits (142), Expect = 3e-10
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
+YVPR+I VDLEP +D +R+G + ++F P+ + + A NN+A+GHYT
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 44.8 bits (101), Expect = 3e-05
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 252
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNG 57
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G EL+D+ L+ +R+ A++C LQG
Sbjct: 109 GKELIDTTLDRIRRLADNCSGLQG 132
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 60.9 bits (141), Expect = 5e-10
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA++VDLEP +D +R+G + +F P+ + + A NN+A+GHYT
Sbjct: 60 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 109
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSG 59
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D L+ +R+ A++C LQG
Sbjct: 111 GKEIIDLTLDRIRRLADNCTGLQG 134
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 60.9 bits (141), Expect = 5e-10
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA++VDLEP +D +R+G + +F P+ + + A NN+A+GHYT
Sbjct: 59 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 108
Score = 43.6 bits (98), Expect = 7e-05
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSG 58
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D L+ +R+ A++C LQG
Sbjct: 110 GKEIIDLTLDRIRRLADNCTGLQG 133
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 60.9 bits (141), Expect = 5e-10
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA++VDLEP +D +R+G + +F P+ + + A NN+A+GHYT
Sbjct: 60 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 109
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSG 59
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D L+ +R+ A++C LQG
Sbjct: 111 GKEIIDLTLDRIRRLADNCTGLQG 134
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 60.9 bits (141), Expect = 5e-10
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRA++VDLEP +D +R+G + +F P+ + + A NN+A+GHYT
Sbjct: 60 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 109
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 252
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSG 59
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D L+ +R+ A++C LQG
Sbjct: 111 GKEIIDLTLDRIRRLADNCTGLQG 134
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPRAI+VDLEP +D +R+G + +F P+ + + A NN+A+GHYT
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYT 114
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 249
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 250 G 252
G
Sbjct: 64 G 64
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D V++ VR+ E+C LQG
Sbjct: 116 GKEIIDVVMDRVRRLVENCRGLQG 139
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 58.8 bits (136), Expect = 2e-09
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPR+I VDLEP +D +R+G + ++F P+ + + A NN+A+GHYT
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYT 106
Score = 40.7 bits (91), Expect = 5e-04
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1
Query: 82 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 183
MRE++ I GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D+ L+ +R+ A +C+ LQG
Sbjct: 108 GKEIIDTTLDRIRRLANNCEGLQG 131
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 52.8 bits (121), Expect = 1e-07
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 85 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGG 252
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GG
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGG 65
Score = 50.8 bits (116), Expect = 5e-07
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPR + VDLEP +D VR+G + +F P+ + + A N +A+G YT
Sbjct: 66 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYT 115
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D V++ V++ AE+C+ LQG
Sbjct: 117 GREMIDVVMDRVKRLAENCNGLQG 140
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +3
Query: 255 YVPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFXQ--SGAGNNWAKGH 395
YVPRA+LVDLEP ++ + P F +F DN GAGNNWA G+
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 91 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 234
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +3
Query: 255 YVPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFXQ--SGAGNNWAKGH 395
YVPRA+LVDLEP ++ + P F +F DN GAGNNWA G+
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 91 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 234
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 50.8 bits (116), Expect = 5e-07
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 252 QYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQSGAGNNWAKGHYT 401
++VPR + VDLEP +D VR+G + +F P+ + + A N +A+G YT
Sbjct: 38 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYT 87
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 404 GAELVDSVLEVVRKEAESCDCLQG 475
G E++D V++ V++ AE+C+ LQG
Sbjct: 89 GREMIDVVMDRVKRLAENCNGLQG 112
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 301 SMVPGSKSTRMARGTYCRRRLHCSIH*CAPTASQSPHG 188
SMV +TR+AR + RR S C P AS P G
Sbjct: 56 SMVNHDDATRVARSVFVRRHKKHSQCNCGPQASNCPAG 93
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 301 SMVPGSKSTRMARGTYCRRRLHCSIH*CAPTASQSPHG 188
SMV S R+AR + RR+ S C P AS P G
Sbjct: 55 SMVNHDDSARVARSVFVRRQKKQSQCNCGPQASNCPAG 92
>Z81048-7|CAC42273.1| 207|Caenorhabditis elegans Hypothetical
protein C41G7.1b protein.
Length = 207
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -1
Query: 432 SKTESTSSAPSCSVPWPS 379
S ++STSSAP+ S+P+PS
Sbjct: 141 SNSKSTSSAPNTSMPFPS 158
>Z81048-6|CAB02838.1| 197|Caenorhabditis elegans Hypothetical
protein C41G7.1a protein.
Length = 197
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -1
Query: 432 SKTESTSSAPSCSVPWPS 379
S ++STSSAP+ S+P+PS
Sbjct: 131 SNSKSTSSAPNTSMPFPS 148
>Y17255-1|CAB41945.1| 197|Caenorhabditis elegans SMN protein
protein.
Length = 197
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -1
Query: 432 SKTESTSSAPSCSVPWPS 379
S ++STSSAP+ S+P+PS
Sbjct: 131 SNSKSTSSAPNTSMPFPS 148
>AF156887-1|AAF00192.1| 207|Caenorhabditis elegans survival motor
neuron protein protein.
Length = 207
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -1
Query: 432 SKTESTSSAPSCSVPWPS 379
S ++STSSAP+ S+P+PS
Sbjct: 141 SNSKSTSSAPNTSMPFPS 158
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = -2
Query: 473 PGGNHTIPLPFERLLKLNRRAQHPRVVSLGPVVAGAGLSEDEVVRTEDLSERSRAXRVHG 294
P T P+ L HPR+ S+GP+ A + S + + + +++S+ + +
Sbjct: 10 PPPGATSPVHTSSTLGRESLPSHPRIPSIGPIAASS--SGNTIDKNQNISQSANFVALFQ 67
Query: 293 AGLQVDED 270
+ D+D
Sbjct: 68 YDARTDDD 75
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 334 KICPKGPERTESMVPGSKSTRMARGTYCRRRLHCSIH*CA 215
K PK ++ ES++P K + +G+ CR+ L CA
Sbjct: 779 KDLPKKIQKYESILPTPKGNKFFKGSICRKGLRGYDEICA 818
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 334 KICPKGPERTESMVPGSKSTRMARGTYCRRRLHCSIH*CA 215
K PK ++ ES++P K + +G+ CR+ L CA
Sbjct: 779 KDLPKKIQKYESILPTPKGNKFFKGSICRKGLRGYDEICA 818
>AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical
protein R08F11.7 protein.
Length = 773
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 317 SRAXRVHGAGLQVDEDGAGHVLPPEASL*YTLMRSNCKSESPW 189
+R R GL + G G+VLPP+A +NC+S +P+
Sbjct: 382 ARTVRSFQNGLLLTNTGIGYVLPPQAP-----NDTNCQSTNPY 419
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 334 KICPKGPERTESMVPGSKSTRMARGTYCRRRLHCSIH*CA 215
K PK ++ ES++P K + +G+ CR+ L CA
Sbjct: 779 KDLPKKIQKYESILPTPKGNKFFKGSICRKGLRGYDEICA 818
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 9/56 (16%)
Frame = -3
Query: 349 KLSGRKICPKGPERTESMVPGSKSTR---------MARGTYCRRRLHCSIH*CAPT 209
K G + CP + TE M G R ++ G C++ L C +H C T
Sbjct: 656 KCHGEQNCPPCTQLTEKMCYGGHRVRKNIPCHIDSVSCGVVCKKPLKCGVHVCQRT 711
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,143,820
Number of Sequences: 27780
Number of extensions: 192398
Number of successful extensions: 609
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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