Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00380
(684 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.76
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.76
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.76
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.76
AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochr... 23 3.1
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 7.1
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 21 9.4
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 21 9.4
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 9.4
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 9.4
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 9.4
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 21 9.4
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.76
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +1
Query: 373 VEYFPSAVFIVVDNKKMVQHLDSPAIKVHKYSDG 474
+++ PSAV +++D K ++L + ++H G
Sbjct: 738 IDFQPSAVLLLIDLMKKNRNLGAACGRIHPVGSG 771
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -3
Query: 265 WFQSCECYFGHW 230
W+Q E GHW
Sbjct: 775 WYQMFEYAIGHW 786
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.76
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +1
Query: 373 VEYFPSAVFIVVDNKKMVQHLDSPAIKVHKYSDG 474
+++ PSAV +++D K ++L + ++H G
Sbjct: 738 IDFQPSAVLLLIDLMKKNRNLGAACGRIHPVGSG 771
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -3
Query: 265 WFQSCECYFGHW 230
W+Q E GHW
Sbjct: 775 WYQMFEYAIGHW 786
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.76
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +1
Query: 373 VEYFPSAVFIVVDNKKMVQHLDSPAIKVHKYSDG 474
+++ PSAV +++D K ++L + ++H G
Sbjct: 738 IDFQPSAVLLLIDLMKKNRNLGAACGRIHPVGSG 771
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -3
Query: 265 WFQSCECYFGHW 230
W+Q E GHW
Sbjct: 775 WYQMFEYAIGHW 786
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.76
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +1
Query: 373 VEYFPSAVFIVVDNKKMVQHLDSPAIKVHKYSDG 474
+++ PSAV +++D K ++L + ++H G
Sbjct: 738 IDFQPSAVLLLIDLMKKNRNLGAACGRIHPVGSG 771
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -3
Query: 265 WFQSCECYFGHW 230
W+Q E GHW
Sbjct: 775 WYQMFEYAIGHW 786
>AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q2 protein.
Length = 126
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 586 VIVKVHKITLYTFLKKMRDSLEDV 515
+++ HK T L++MRD L D+
Sbjct: 10 MLIACHKDVQETILQEMRDVLGDI 33
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 198 IASTISKLWFLP 163
+A+T +K WFLP
Sbjct: 102 VATTKTKAWFLP 113
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 599 SDHRGNCQSPQD 564
+D GNC+ P+D
Sbjct: 205 ADGTGNCEDPED 216
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 599 SDHRGNCQSPQD 564
+D GNC+ P+D
Sbjct: 205 ADGTGNCEDPED 216
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 168 LPPSLVFPASARSTPFTAQ 112
LPP P+ RS+P A+
Sbjct: 71 LPPKREIPSPKRSSPILAE 89
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 168 LPPSLVFPASARSTPFTA 115
+ PS+++P RS+P TA
Sbjct: 239 MAPSVMYPHLNRSSPTTA 256
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 168 LPPSLVFPASARSTPFTA 115
+ PS+++P RS+P TA
Sbjct: 187 MAPSVMYPHLNRSSPTTA 204
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 168 LPPSLVFPASARSTPFTA 115
+ PS+++P RS+P TA
Sbjct: 370 MAPSVMYPHLNRSSPTTA 387
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,892
Number of Sequences: 336
Number of extensions: 3515
Number of successful extensions: 28
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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