Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00380
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 69 1e-11
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 69 1e-11
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 69 1e-11
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 69 1e-11
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 69 1e-11
AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein pr... 69 1e-11
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 69 1e-11
AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein. 66 1e-10
BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open read... 63 1e-09
AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein. 62 2e-09
X83929-1|CAA58781.1| 896|Homo sapiens desmocollin type 3 protein. 33 1.3
D17427-1|BAA04249.1| 896|Homo sapiens desmocollin type 4 protein. 33 1.3
AF293359-2|AAG23427.1| 839|Homo sapiens desmocollin 3b protein. 33 1.3
AF293359-1|AAG23426.1| 896|Homo sapiens desmocollin 3a protein. 33 1.3
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 69.3 bits (162), Expect = 1e-11
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 205
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 206 FHHSHYVSPMAEVALT 253
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 256 IETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYFPSAVFIVVDNKKMVQHL 435
I++ + + VIAGYY A E +D + K+A +I E F I+VDN K
Sbjct: 78 IDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGFSDTALIMVDNTKFTMDC 136
Query: 436 DSPAIKVHKYSDGKWRPRD 492
+P I V+++ + +WR RD
Sbjct: 137 VAPTIHVYEHHENRWRCRD 155
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +2
Query: 500 CFPSPYVLETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQGIEKLV 637
C P + LL LVDFDN+LDD DWTN I K V
Sbjct: 161 CEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINKAV 206
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 69.3 bits (162), Expect = 1e-11
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 205
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 206 FHHSHYVSPMAEVALT 253
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 256 IETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYFPSAVFIVVDNKKMVQHL 435
I++ + + VIAGYY A E +D + K+A +I E F I+VDN K
Sbjct: 78 IDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGFSDTALIMVDNTKFTMDC 136
Query: 436 DSPAIKVHKYSDGKWRPRD 492
+P I V+++ + +WR RD
Sbjct: 137 VAPTIHVYEHHENRWRCRD 155
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +2
Query: 500 CFPSPYVLETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQGIEKLV 637
C P + LL LVDFDN+LDD DWTN I K V
Sbjct: 161 CEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINKAV 206
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 69.3 bits (162), Expect = 1e-11
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 205
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 206 FHHSHYVSPMAEVALT 253
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 256 IETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYFPSAVFIVVDNKKMVQHL 435
I++ + + VIAGYY A E +D + K+A +I E F I+VDN K
Sbjct: 78 IDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGFSDTALIMVDNTKFTMDC 136
Query: 436 DSPAIKVHKYSDGKWRPRD 492
+P I V+++ + +WR RD
Sbjct: 137 VAPTIHVYEHHENRWRCRD 155
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +2
Query: 500 CFPSPYVLETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQGIEKLV 637
C P + LL LVDFDN+LDD DWTN I K V
Sbjct: 161 CEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINKAV 206
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 69.3 bits (162), Expect = 1e-11
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 205
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 206 FHHSHYVSPMAEVALT 253
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 256 IETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYFPSAVFIVVDNKKMVQHL 435
I++ + + VIAGYY A E +D + K+A +I E F I+VDN K
Sbjct: 78 IDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGFSDTALIMVDNTKFTMDC 136
Query: 436 DSPAIKVHKYSDGKWRPRD 492
+P I V+++ + +WR RD
Sbjct: 137 VAPTIHVYEHHENRWRCRD 155
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +2
Query: 500 CFPSPYVLETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQGIEKLV 637
C P + LL LVDFDN+LDD DWTN I K V
Sbjct: 161 CEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINKAV 206
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 69.3 bits (162), Expect = 1e-11
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 205
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 206 FHHSHYVSPMAEVALT 253
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 256 IETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYFPSAVFIVVDNKKMVQHL 435
I++ + + VIAGYY A E +D + K+A +I E F I+VDN K
Sbjct: 78 IDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGFSDTALIMVDNTKFTMDC 136
Query: 436 DSPAIKVHKYSDGKWRPRD 492
+P I V+++ + +WR RD
Sbjct: 137 VAPTIHVYEHHENRWRCRD 155
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +2
Query: 500 CFPSPYVLETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQGIEKLV 637
C P + LL LVDFDN+LDD DWTN I K V
Sbjct: 161 CEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINKAV 206
>AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein
protein.
Length = 77
Score = 69.3 bits (162), Expect = 1e-11
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 205
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 206 FHHSHYVSPMAEVALT 253
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 69.3 bits (162), Expect = 1e-11
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 205
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 206 FHHSHYVSPMAEVALT 253
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 256 IETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYFPSAVFIVVDNKKMVQHL 435
I++ + + VIAGYY A E +D + K+A +I E F I+VDN K
Sbjct: 78 IDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGFSDTALIMVDNTKFTMDC 136
Query: 436 DSPAIKVHKYSDGKWRPRD 492
+P I V+++ + +WR RD
Sbjct: 137 VAPTIHVYEHHENRWRCRD 155
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +2
Query: 500 CFPSPYVLETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQGIEKLV 637
C P + LL LVDFDN+LDD DWTN I K V
Sbjct: 161 CEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINKAV 206
>AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 65.7 bits (153), Expect = 1e-10
Identities = 35/72 (48%), Positives = 45/72 (62%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 223
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ EG L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGEG-----LCLTDCVPLFHSHLA 55
Query: 224 VSPMAEVALTRL 259
+S M EVAL ++
Sbjct: 56 LSVMLEVALNQV 67
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 286 VIAGYYAACENFRDNIVERCPG---LKIAEKIVEYFPSAVFIVVDNKKMVQHLDSPAIKV 456
V+AGYY A D + PG LKIA +I E+FP AV I++DN+K+V P + V
Sbjct: 77 VVAGYYHANAAVND----QSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQPRVPPVIV 132
Query: 457 HKYSDGKWRPRD 492
+ +W P+D
Sbjct: 133 LENQGLRWVPKD 144
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 524 ETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQ 619
+ V LL+ + LVDFD +LDD QDWTNQ
Sbjct: 158 QMVGALLEDRAHQHLVDFDCHLDDIRQDWTNQ 189
>BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open reading
frame 122 protein.
Length = 208
Score = 62.9 bits (146), Expect = 1e-09
Identities = 34/72 (47%), Positives = 44/72 (61%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 223
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ E L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGE-----CLCLTDCVPLFHSHLA 55
Query: 224 VSPMAEVALTRL 259
+S M EVAL ++
Sbjct: 56 LSVMLEVALNQV 67
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 286 VIAGYYAACENFRDNIVERCPG---LKIAEKIVEYFPSAVFIVVDNKKMVQHLDSPAIKV 456
V+AGYY A D + PG LKIA +I E+FP AV I++DN+K+V P + V
Sbjct: 77 VVAGYYHANAAVND----QSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQPRVPPVIV 132
Query: 457 HKYSDGKWRPRD 492
+ +W P+D
Sbjct: 133 LENQGLRWVPKD 144
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 524 ETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQ 619
+ V LL+ + LVDFD +LDD QDWTNQ
Sbjct: 158 QMVGALLEDRAHQHLVDFDCHLDDIRQDWTNQ 189
>AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 61.7 bits (143), Expect = 2e-09
Identities = 33/72 (45%), Positives = 42/72 (58%)
Frame = +2
Query: 44 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 223
M EV I Y K+ LHAA+YPH AVNG+ LA A G + L + D +PLFH
Sbjct: 1 MGEVEISGPGYVKMCLHAARYPHAAVNGLFLAPA-----TGSGECLCLTDCVPLFHSHLA 55
Query: 224 VSPMAEVALTRL 259
+S M EVAL ++
Sbjct: 56 LSVMLEVALNQV 67
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 286 VIAGYYAACENFRDNIVERCPG---LKIAEKIVEYFPSAVFIVVDNKKMVQHLDSPAIKV 456
V+AGYY A D + PG LKIA +I E+FP AV I++DN+K+V P + V
Sbjct: 77 VVAGYYHANAAVND----QSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQPRVPPVIV 132
Query: 457 HKYSDGKWRPRD 492
+ +W P+D
Sbjct: 133 LENQGLRWVPKD 144
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 524 ETVSHLLQKGVERDLVDFDNYLDDQSQDWTNQ 619
+ V LL+ + LVDFD +LDD QDWTNQ
Sbjct: 158 QMVGALLEDRAHQHLVDFDCHLDDIRQDWTNQ 189
>X83929-1|CAA58781.1| 896|Homo sapiens desmocollin type 3 protein.
Length = 896
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 437 IHQQLKFINIQMANGDQGIFNCFPSPYVLETVSHLLQKGV 556
+H +LK+ +Q G+F+ PS V+ TVSH L + V
Sbjct: 276 MHTRLKYSILQQTPRSPGLFSVHPSTGVITTVSHYLDREV 315
>D17427-1|BAA04249.1| 896|Homo sapiens desmocollin type 4 protein.
Length = 896
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 437 IHQQLKFINIQMANGDQGIFNCFPSPYVLETVSHLLQKGV 556
+H +LK+ +Q G+F+ PS V+ TVSH L + V
Sbjct: 276 MHTRLKYSILQQTPRSPGLFSVHPSTGVITTVSHYLDREV 315
>AF293359-2|AAG23427.1| 839|Homo sapiens desmocollin 3b protein.
Length = 839
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 437 IHQQLKFINIQMANGDQGIFNCFPSPYVLETVSHLLQKGV 556
+H +LK+ +Q G+F+ PS V+ TVSH L + V
Sbjct: 276 MHTRLKYSILQQTPRSPGLFSVHPSTGVITTVSHYLDREV 315
>AF293359-1|AAG23426.1| 896|Homo sapiens desmocollin 3a protein.
Length = 896
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 437 IHQQLKFINIQMANGDQGIFNCFPSPYVLETVSHLLQKGV 556
+H +LK+ +Q G+F+ PS V+ TVSH L + V
Sbjct: 276 MHTRLKYSILQQTPRSPGLFSVHPSTGVITTVSHYLDREV 315
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,312,605
Number of Sequences: 237096
Number of extensions: 2059304
Number of successful extensions: 7814
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7798
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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