Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00380
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   4.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   4.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.3  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.3  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = +1

Query: 316 NFRDNIVERCPGLKIAEKIVEYFPSAVFIVVD 411
           NF++NIV+    + + E +++   +   ++ D
Sbjct: 78  NFKENIVQELTSIYLDENVIKKLVAECSVISD 109


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = +1

Query: 316 NFRDNIVERCPGLKIAEKIVEYFPSAVFIVVD 411
           NF++NIV+    + + E +++   +   ++ D
Sbjct: 78  NFKENIVQELTSIYLDENVIKKLVAECSVISD 109


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +2

Query: 443 QQLKFINIQMANGDQGIFNCFPSPYVLETVSHLL 544
           Q L+ IN++    ++ +     SP  L  ++H+L
Sbjct: 28  QALELINLENFFPEENVVEELLSPLTLNRITHIL 61


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 124 IHSTVWILSGVQYYFS 77
           ++  ++ILSG  YYFS
Sbjct: 305 LNEWLYILSGCLYYFS 320


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 274 IEQWFQSCECYF 239
           I  WFQ+  CYF
Sbjct: 530 IYNWFQNTFCYF 541


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,879
Number of Sequences: 438
Number of extensions: 3776
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)