Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00379
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    26   1.1  
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    24   4.3  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    24   4.3  
Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    24   5.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   5.7  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = +1

Query: 235 IVDEIPLPLWTRTAGYTLLSPSRTDLSAASERITCNPASAHMSKDKT 375
           ++D++PLP        + +SP   +L +A+     NPA+ + + + T
Sbjct: 448 LMDDMPLPYHDHNHHNSPMSPINFNLLSAASTAVPNPAATNATANST 494


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 429 AILFYVPRYLWKTWEGGRIKMLVLDLNVPSLKTSASR 539
           A++F V RY++  WE   +  L  ++   +++T A +
Sbjct: 11  AVIFLVLRYIYSHWERHGLPHLKPEIPYGNIRTVAEK 47


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 429 AILFYVPRYLWKTWEGGRIKMLVLDLNVPSLKTSASR 539
           A++F V RY++  WE   +  L  ++   +++T A +
Sbjct: 11  AVIFLVLRYIYSHWERHGLPHLKPEIPYGNIRTVAEK 47


>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 462 KTWEGGRIKMLVLDLNVPSLKTSASRVVKSYLSTIST 572
           +T EGG +  LV  ++VP L     R +K   S I++
Sbjct: 139 RTSEGGTLPALVQHVDVPILTLDQCRSMKYRASRITS 175


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 195  RHVATVHR*PD*LHR**NPAAVMDTYCW 278
            RHV  +H   D + R  NPA V++   W
Sbjct: 1160 RHVPGIHNPADAVSRGRNPAEVVEDKLW 1187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,587
Number of Sequences: 2352
Number of extensions: 17197
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)