Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00376
(372 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 131 3e-30
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 131 3e-30
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 113 1e-24
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 104 4e-22
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 94 8e-19
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 86 2e-16
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 86 2e-16
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 84 7e-16
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 81 8e-15
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 74 1e-12
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 72 4e-12
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 68 5e-11
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 62 2e-09
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 58 5e-08
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 54 1e-06
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 53 2e-06
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 52 3e-06
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 52 3e-06
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 49 3e-05
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 48 4e-05
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 46 2e-04
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 46 2e-04
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 46 3e-04
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 46 3e-04
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 44 9e-04
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 43 0.002
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 42 0.004
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 41 0.006
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 38 0.044
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 37 0.10
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 36 0.18
UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1; Cyanidi... 35 0.54
UniRef50_A4M6X1 Cluster: Glycosyl transferase, group 1; n=1; Pet... 34 0.95
UniRef50_A6F884 Cluster: Haemin ABC transporter, permease protei... 33 1.7
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 33 1.7
UniRef50_Q7QBW9 Cluster: ENSANGP00000015377; n=1; Anopheles gamb... 33 1.7
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 33 2.2
UniRef50_A6GHY6 Cluster: Serine/threonine-protein kinase; n=1; P... 32 2.9
UniRef50_Q6F0V8 Cluster: Putative uncharacterized protein; n=1; ... 32 3.8
UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candida... 32 3.8
UniRef50_Q54I73 Cluster: Putative uncharacterized protein; n=1; ... 32 3.8
UniRef50_Q4REE8 Cluster: Chromosome 10 SCAF15123, whole genome s... 31 6.7
UniRef50_A6SZB5 Cluster: Uncharacterized giant conserved protein... 31 6.7
UniRef50_A0KM89 Cluster: Polysaccharide biosynthesis protein; n=... 31 6.7
UniRef50_Q84ZG1 Cluster: Putative uncharacterized protein P0656C... 31 6.7
UniRef50_Q4QG46 Cluster: Putative uncharacterized protein; n=2; ... 31 6.7
UniRef50_A4HCF1 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q5B343 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q9FBI4 Cluster: Putative integral membrane protein; n=2... 31 8.8
UniRef50_Q6MZ46 Cluster: Putative uncharacterized protein MUP065... 31 8.8
UniRef50_A7I361 Cluster: MloA; n=1; Campylobacter hominis ATCC B... 31 8.8
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 131 bits (317), Expect = 3e-30
Identities = 61/106 (57%), Positives = 78/106 (73%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
+IDGRGHLLGRLA+VIAK +L G KVVVVRCE + +SG+FFRNK+K +++LRKRCNV
Sbjct: 10 LIDGRGHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYLRKRCNVNPA 69
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
F F + + + VPHKT+RG NAL+RL+ Y+G P PFD
Sbjct: 70 RGPFHFRAPSRMLWKAVRGMVPHKTKRGHNALKRLKVYEGIPSPFD 115
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 131 bits (317), Expect = 3e-30
Identities = 60/110 (54%), Positives = 80/110 (72%)
Frame = +2
Query: 2 NSARVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCN 181
N VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++LRKRCN
Sbjct: 6 NRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCN 65
Query: 182 VQSCSWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
V F F + + + +PHKT+RG+ AL RLR +DG P P+D
Sbjct: 66 VNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYD 115
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 113 bits (271), Expect = 1e-24
Identities = 56/106 (52%), Positives = 69/106 (65%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+D RGHLLGRLAA +AK LL G +VV VR E+INISG+ FRNKLK +FL+KR N
Sbjct: 7 VVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNTNPR 66
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
F F S + +PHKT RG AL RL+ ++G PPP+D
Sbjct: 67 RGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYD 112
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 104 bits (250), Expect = 4e-22
Identities = 49/106 (46%), Positives = 68/106 (64%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+D R H+LGRL++++AK LL G +VVVVRCE+I +SG R K+K + FLRKR N +
Sbjct: 13 VVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPS 72
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
F + + +PHKT+RG AL RL+ Y+G PPP+D
Sbjct: 73 HGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPPPYD 118
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 93.9 bits (223), Expect = 8e-19
Identities = 48/106 (45%), Positives = 64/106 (60%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
VID +GHLLGRLA+ +AK LL G ++VVVR E INISG+ FRN++K FL K N
Sbjct: 79 VIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLNKWMNHNPR 138
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
F + + +PHKT +G AL RL+ ++G P P+D
Sbjct: 139 RGVQHFRAPSRIFWRAVRGMLPHKTPKGAAALERLKIFEGIPTPYD 184
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 85.8 bits (203), Expect = 2e-16
Identities = 44/103 (42%), Positives = 61/103 (59%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
VID +GH+LGRL+A++AK LL G++V +VRCE+ ISG F K + + KR N
Sbjct: 5 VIDCKGHILGRLSAIVAKELLHGHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNHL 64
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPP 322
F F + + +P+KT RG +A+ RLR YDG PP
Sbjct: 65 RGPFHFRAPAEIVRRTIRGMIPYKTVRGSDAMSRLRVYDGIPP 107
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 85.8 bits (203), Expect = 2e-16
Identities = 45/103 (43%), Positives = 60/103 (58%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
VID + H+LGR AAV+AK LL G K+ VVRCEQ+NI+G RNK+K + +LRKR
Sbjct: 26 VIDLKDHVLGRAAAVVAKQLLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNPT 85
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPP 322
F + + + +P T+RG AL L Y+G PP
Sbjct: 86 KGPFHHRAPSDVFVRTVRSMLPRYTKRGMKALNSLVAYEGIPP 128
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 84.2 bits (199), Expect = 7e-16
Identities = 40/105 (38%), Positives = 62/105 (59%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+D + HLLGR+A++ AK +L+G+K++++R E +I+G RN K S +K+ N
Sbjct: 5 VLDAKNHLLGRMASICAKKILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNTNPR 64
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPF 328
F F S + KR +PHKT RG AL+ L+ ++G P F
Sbjct: 65 RGPFHFKSPSKILYQTIKRMIPHKTMRGSKALKNLKIFEGLPRIF 109
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 80.6 bits (190), Expect = 8e-15
Identities = 41/106 (38%), Positives = 59/106 (55%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
VID +GHL GRLA++++K LL+G VVVVR E I +SG R ++ + KR N
Sbjct: 6 VIDAKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMNTNPK 65
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ + S + + +PHKT RG A R + Y+G P P+D
Sbjct: 66 KGPYHYTSPSRLFWKTVRGMLPHKTVRGAAAFERFKAYEGIPAPYD 111
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 73.7 bits (173), Expect = 1e-12
Identities = 42/85 (49%), Positives = 53/85 (62%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+ GRGHLLG LAA +AK +L G KVVVV E INISGNF+RNKLK ++FL K+ N
Sbjct: 8 VLSGRGHLLGCLAATVAKQVL-GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQMNTNPS 66
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKT 268
+ F + + +PHKT
Sbjct: 67 RGPYRFQAPSRIFWWTARGMLPHKT 91
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 71.7 bits (168), Expect = 4e-12
Identities = 40/105 (38%), Positives = 55/105 (52%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
VID +GH+ GRLAA +AK LL+G KVVVVRCE+I ++G FL K N
Sbjct: 6 VIDAKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNPR 65
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPF 328
F + + +P+KT RG +A L+ Y+G P +
Sbjct: 66 DGPFHQRAPHEIFARAVRGMIPYKTHRGADAFANLQCYEGIPAKY 110
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 68.1 bits (159), Expect = 5e-11
Identities = 39/102 (38%), Positives = 54/102 (52%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
+ID G + G+LAA +AK+LLEG +V VV E+ G+ R K +L KRC V
Sbjct: 8 IIDATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNPR 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCP 319
F F + +R + +K RGK A+ RL TY+G P
Sbjct: 68 RGPFHFREPRMHLAKIIRRMISYKKPRGKAAMSRLATYEGIP 109
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 62.5 bits (145), Expect = 2e-09
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Frame = +2
Query: 11 RVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGN--FFRNKLKLMSFLRKRCNV 184
R+I+ G +LGRLA+ +AK+LLEG +VV+V E+ I+GN +K K + LR N
Sbjct: 2 RIINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNP 61
Query: 185 QSCSWTFPF*SSI*DSM--EDCKRYVPHKTERGKNALRRLRTYDGCPPPFDN 334
+ PF D + + +P KT+RG+ A RRL+ Y G P F +
Sbjct: 62 R----RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQD 109
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 58.0 bits (134), Expect = 5e-08
Identities = 28/68 (41%), Positives = 39/68 (57%)
Frame = +2
Query: 2 NSARVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCN 181
N VID GH+LGR+A+V+AK LL G K+V+VRCE + + G ++ + RKR N
Sbjct: 9 NKVTVIDCHGHVLGRVASVVAKHLLLGQKIVLVRCEDLQVCGTLKMRLVQWELYQRKRVN 68
Query: 182 VQSCSWTF 205
F
Sbjct: 69 TNPTRGAF 76
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 53.6 bits (123), Expect = 1e-06
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +2
Query: 8 ARVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQ 187
A VIDG GH+ GRLA+V+AK LL+G++VVVV E+I I+G R K + +
Sbjct: 7 AIVIDGTGHIAGRLASVVAKRLLKGDRVVVVNAEKIVITGKPKRVVEKYLKRWVEWKTYY 66
Query: 188 SCSWTFPF*SSI*DSM--EDCKRYVPHKTERGKNALRRLRTYDGCPPPFDN 334
+ P D + + +P + G+++L+RL Y G P + N
Sbjct: 67 NPELRGPKYPKTPDRLFKRMVRGMLPMEKTIGRDSLKRLTVYVGLPDEYRN 117
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 35 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQ 187
+LGRLA+++AK L + +VRCE+I ISG R K+K M FLR+R N +
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISGGLGRQKMKYMRFLRRRMNTK 51
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 52.4 bits (120), Expect = 3e-06
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
++D H+ GRLA+ +AK+LLEGN+V ++ CE++ ISG + FL+ +
Sbjct: 1 MVDATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPE 60
Query: 194 SWTFPF*SSI*DSM--EDCKRYVPHKTERGKNALRRLRTYDGCP 319
P+ D++ + +P K GK A RLR Y G P
Sbjct: 61 HG--PYHPRRPDTIMTRMIRGMLPRKKPSGKAAHSRLRAYIGSP 102
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 52.0 bits (119), Expect = 3e-06
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLR-KRCNVQS 190
VID GH+LGRL++ IAK LL G ++VVV E+ I+G+ K M F R K +
Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD------KYMVFERYKEKYDRG 71
Query: 191 CSWTFPF*SSI*DSM--EDCKRYVPHKTERGKNALRRLRTYDGCP 319
P+ + + + +P K+ RG++A RRLR + G P
Sbjct: 72 SKEKGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVP 116
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 48.8 bits (111), Expect = 3e-05
Identities = 34/102 (33%), Positives = 53/102 (51%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
VID +LGRLA+V+AK +L+G ++ V+ E+ I+G +N +K +L+K
Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPK 73
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCP 319
F + +P KT+RG+ A +RLR Y G P
Sbjct: 74 KGPFYPRRPDLIFRRVVRGMLPWKTKRGREAFKRLRAYIGTP 115
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 48.4 bits (110), Expect = 4e-05
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQ-- 187
V+DG G ++GRLA+V+AK+LL G +V VV E+I +SG+ ++ + S+ V+
Sbjct: 12 VVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD---PRMVVESYRTTVLGVKSH 68
Query: 188 -SCSWTFPF*SSI*DSMEDCKR-YVPHKTERGKNALRRLRTYDGCP 319
S W + + R +P RG+ AL RLR Y G P
Sbjct: 69 FSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVP 114
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 46.0 bits (104), Expect = 2e-04
Identities = 34/106 (32%), Positives = 52/106 (49%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+D R H+L RLA++IAK LL G +VV + + + FR+ K++
Sbjct: 13 VVDARHHMLSRLASIIAKELLNGKRVVRMNTKPSH-GPIHFRSPAKIL------------ 59
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
W + +PHKT+RG+ AL RL+ Y+ PP+D
Sbjct: 60 -W------------RTVRGMIPHKTKRGEAALARLKAYEVVTPPYD 92
Score = 44.4 bits (100), Expect = 7e-04
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +3
Query: 189 PARGPFHFRAPSKILWKTVRGM 254
P+ GP HFR+P+KILW+TVRGM
Sbjct: 45 PSHGPIHFRSPAKILWRTVRGM 66
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 46.0 bits (104), Expect = 2e-04
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+D H+ GRL++ +AK+L +G++V +V CE+I SG + FL +
Sbjct: 15 VVDATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINSIINPK 74
Query: 194 SWTFPF*SSI*DSMEDCKRYVPH-KTERGKNALRRLRTYDGCP 319
+ + ++ +P+ + GK +++RLR Y G P
Sbjct: 75 HGPVHYRRPDTIITKMIRQMLPYDRKPSGKESIKRLRAYIGSP 117
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 45.6 bits (103), Expect = 3e-04
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLE--GNKVVVVRCEQINISGN------FFRNKLKLMSFLR 169
++D GH+ GRLA IAK LLE ++VVV E++ I+G+ +F+ K+ S R
Sbjct: 20 IVDAEGHVAGRLATYIAKALLERPNLRIVVVNAEKLVITGDEKMVIEWFKRKI---SEWR 76
Query: 170 KRCNVQSCSWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCP 319
N + P + +P K+E G++AL+RLR Y P
Sbjct: 77 THYNPEKAGPKVPRRPDR-VFKRIVRGMLPKKSETGRSALKRLRVYMSIP 125
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 45.6 bits (103), Expect = 3e-04
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGN-KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQS 190
VID +G +LGRLA+ +AK LL G+ KV ++ E+ ISG+ L + R +
Sbjct: 3 VIDAKGLILGRLASSVAKQLLSGDEKVYIINAEKAIISGS---RAATLREYRETR--DRG 57
Query: 191 CSWTFPF*SSI*DSM--EDCKRYVPHKTERGKNALRRLRTYDGCP 319
+ P+ D + + +P+K RG++A+ RL+ Y G P
Sbjct: 58 ATEFGPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGVP 102
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 44.0 bits (99), Expect = 9e-04
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+D R +LGR+++ +A+ +L+G V VV E+ I+GN + M R + S
Sbjct: 11 VVDARDCILGRVSSKVAQRVLDGETVAVVNAERAVITGN----EEATMETYHTRAELGSD 66
Query: 194 SWTFPF*SSI*DSM--EDCKRYVPHKTERGKNALRRLRTYDGCP 319
S P+ D + + +P+KTE G+ AL +R Y G P
Sbjct: 67 SG--PYYPKRPDRIFKRAIRGMLPYKTEDGREALSNVRVYVGNP 108
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 43.2 bits (97), Expect = 0.002
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG--NFFRNKLKLMSFLRKRCNVQ 187
+I+ G +LGR+A+ + ++L EG KV++V E+ ISG N KL+ ++ N
Sbjct: 11 IINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLTVKTLFNPY 70
Query: 188 SCSWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
P S I + +P K+ +G+ L+ ++ Y G P F+
Sbjct: 71 RNGIRRPR-SPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFE 116
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 41.9 bits (94), Expect = 0.004
Identities = 27/102 (26%), Positives = 51/102 (50%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
++D R ++GR+A+ +A+ L+G V VV E+ I+G + +++ KR ++ +
Sbjct: 11 IVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITG----REEQIVEKYEKRVDIGND 66
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCP 319
+ F + +PHK +RG+ A +R Y G P
Sbjct: 67 NGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNP 108
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 41.1 bits (92), Expect = 0.006
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNF--FRNKLKLMSFLRKRCNVQ 187
VIDGR L+GRLA+ I +L +G + V+RC+ + SG + N++ L+ R N
Sbjct: 6 VIDGRNQLIGRLASNIVILLKKGYTLKVIRCKDLVFSGRYEHVYNRILKKKNLKTRTNPN 65
Query: 188 SCSWTFPF*SSI 223
+ F SS+
Sbjct: 66 KGPYFFSNPSSL 77
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 186 NPARGPFHFRAPSKILWKTVRGM 254
NP +GP+ F PS +L K V+GM
Sbjct: 63 NPNKGPYFFSNPSSLLKKIVKGM 85
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 38.3 bits (85), Expect = 0.044
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +2
Query: 17 IDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSCS 196
ID H+ GRL++ +AK LL G + +V ++ I+G R + + F R N S
Sbjct: 4 IDASNHIYGRLSSYVAKKLLNGESITIVNASKVVITG---RKEFIIDKFNNLR-NTGSIR 59
Query: 197 WTFPF*SSI*DSM--EDCKRYVPHKTERGKNALRRLRTYDGCPPPFDN 334
P+ D + +P K G AL+R Y P +N
Sbjct: 60 -KGPYYPKTADRILKRSIGDMLPKKKTHGMEALKRCMVYANVPKSLEN 106
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 37.1 bits (82), Expect = 0.10
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 127
++D +LGR++ IAK+L G KV VV E+ ISG
Sbjct: 9 IVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISG 46
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 36.3 bits (80), Expect = 0.18
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V++ ++GRLA+ +AK+ L G ++ VV E+ ++GN K + LR R ++ +
Sbjct: 3 VVNAENAVVGRLASYVAKLALSGEEITVVNAEKAIMTGNKEYIFQKYVQ-LRTRKSISNP 61
Query: 194 SWTFPF*SSI*DSM--EDCKRYVPHKTERGKNALRRLRTYDGCP 319
P D + + +P+K RG A ++++ G P
Sbjct: 62 KKMGPKYPRRPDDIVRRVIRGMLPYKKPRGVEAFKKIKIEVGVP 105
>UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L13 -
Cyanidioschyzon merolae (Red alga)
Length = 98
Score = 34.7 bits (76), Expect = 0.54
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNK--VVVVRCEQINISGNFFRNK 145
+I+ + +LGRLA+ + K LL + + +V+ QI ++GN ++NK
Sbjct: 2 LINAKDEILGRLASRVVKTLLTQSVTCIEIVQANQIQVTGNKYKNK 47
>UniRef50_A4M6X1 Cluster: Glycosyl transferase, group 1; n=1;
Petrotoga mobilis SJ95|Rep: Glycosyl transferase, group
1 - Petrotoga mobilis SJ95
Length = 440
Score = 33.9 bits (74), Expect = 0.95
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = -1
Query: 258 GTYLLQSSIES*MEL*NGKVHEQDCTLHLLRRNDISLSLFLKKL 127
GT++ + +IES L + K +E+DCTL+++ + + LKKL
Sbjct: 179 GTFIDKDNIESKTTLFHKKAYEKDCTLNIITNDGTKGDVVLKKL 222
>UniRef50_A6F884 Cluster: Haemin ABC transporter, permease protein,
putative; n=1; Moritella sp. PE36|Rep: Haemin ABC
transporter, permease protein, putative - Moritella sp.
PE36
Length = 363
Score = 33.1 bits (72), Expect = 1.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 57 SSPRSFSKGTK-LLWFAANKSTSLATSLGTNSSLCHSCVRGATCNPARGPFHFRA 218
S P +SKG + ++WF LA +G +L +C++ T NP P+ F A
Sbjct: 71 SMPVIWSKGQESIVWFIRLPRILLAVLVGAGLALVGTCLQAVTRNPMADPYLFGA 125
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 33.1 bits (72), Expect = 1.7
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 272 RGKNALRRLRTYDGCPPPFD 331
RG+ AL RL+ Y+G PPP+D
Sbjct: 9 RGEAALARLKAYEGVPPPYD 28
>UniRef50_Q7QBW9 Cluster: ENSANGP00000015377; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000015377 - Anopheles gambiae
str. PEST
Length = 844
Score = 33.1 bits (72), Expect = 1.7
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 108 NKSTSLATSLGTNSSLCHSCVRGATCNPARGPFHFRAPSKILWKTVRGMSHTKQSVARML 287
++ +LA +N L S V NPA GP P+ L + G H Q++A+
Sbjct: 434 HRLANLAGETASND-LTDSIVPVVNSNPATGPAGGATPNFTLADLISGNQHAIQALAKYS 492
Query: 288 LGGYVHMMGALL 323
+GG GA+L
Sbjct: 493 MGGQDMSNGAML 504
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 32.7 bits (71), Expect = 2.2
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Frame = +3
Query: 186 NPARGPFHFRAPSKILWKTVRGM------SHTKQSV--ARMLLGGYVHMMGALLP 326
+P +GPF R P IL +TVRGM S +Q+V R+++G ++ G LP
Sbjct: 68 HPRKGPFFPRMPDMILKRTVRGMLPYQKKSSGRQAVKDLRVMIGTPTNLKGEALP 122
>UniRef50_A6GHY6 Cluster: Serine/threonine-protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep:
Serine/threonine-protein kinase - Plesiocystis pacifica
SIR-1
Length = 1206
Score = 32.3 bits (70), Expect = 2.9
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 102 AANKSTSLATSLGTNSSLCHSCVRGATCNPARGPFHFRAPSKILWKTVRG 251
+A ++ + G +S+ C R TC+P R P H RA +W VRG
Sbjct: 646 SAGEARGASFECGRPNSVSGDCGR-ITCDPDRVPTHARAARTQVWDAVRG 694
>UniRef50_Q6F0V8 Cluster: Putative uncharacterized protein; n=1;
Mesoplasma florum|Rep: Putative uncharacterized protein
- Mesoplasma florum (Acholeplasma florum)
Length = 339
Score = 31.9 bits (69), Expect = 3.8
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 84 TKLLWFAANKSTSLATSLGTNSSLCHSCVRGATCNPARGPFHFRAPSKILWKTVRGMSH- 260
T L++ + + T +ATSLG SL + T FH P + + GM+H
Sbjct: 177 TFLIYQLSLRPTVIATSLGNGESLLQAIFPSVTSVIENEVFHTFGPIAFVLYVILGMNHD 236
Query: 261 TKQSVARMLLGGYVHMMGALLPLITVDV 344
+K++++ L + + M ++ LI+ V
Sbjct: 237 SKENISTKFL--HKNWMQGIITLISYGV 262
>UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candidatus
Tremblaya princeps|Rep: 50S ribosomal protein L13 -
Tremblaya princeps
Length = 124
Score = 31.9 bits (69), Expect = 3.8
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Frame = +2
Query: 2 NSARVIDGRGHLLGRLAAVIAKVL------------LEGNKVVVVRCEQINISGN 130
N V+D RG +LGRLA +A +L N V V+ CE + ISG+
Sbjct: 4 NGQHVLDARGMVLGRLAVTVAGLLRGKYKASYAHNAAPHNAVTVLNCEHVRISGS 58
>UniRef50_Q54I73 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1471
Score = 31.9 bits (69), Expect = 3.8
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 LGRLAAVIAKVLLEGNKVVVVRCE-QINISGNFFRNKLKLMSFLRKRCNVQSCSWTFPF* 214
L LA +I VL+E N R E +I +S F N+ K +S RKR N + S T
Sbjct: 991 LDSLALIIGSVLIEAN--TCERSEFEIKVSSKAFENQFKYISEQRKRIN-DNISQTIKLV 1047
Query: 215 SSI*DSMEDCKRY 253
+S+ED ++
Sbjct: 1048 VENIESIEDLLKF 1060
>UniRef50_Q4REE8 Cluster: Chromosome 10 SCAF15123, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 10 SCAF15123, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 568
Score = 31.1 bits (67), Expect = 6.7
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 173 RCNVQSCSWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLR-TYDGCPPPF 328
R N Q CSW S S+E C+R P T RG+ LRR R T D PF
Sbjct: 82 RGNAQVCSW------SCRRSLEPCRRSSPSCTFRGRVLLRRARETGDQRDRPF 128
>UniRef50_A6SZB5 Cluster: Uncharacterized giant conserved protein;
n=1; Janthinobacterium sp. Marseille|Rep:
Uncharacterized giant conserved protein -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 4130
Score = 31.1 bits (67), Expect = 6.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 17 IDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMS 160
+ +GH +G AA + L GN+V+ + IN+SG F + ++S
Sbjct: 586 LSNQGHSIGEWAAQGGTLTLGGNEVITQQGSAINLSGGSFNVQTGMIS 633
>UniRef50_A0KM89 Cluster: Polysaccharide biosynthesis protein; n=2;
Gammaproteobacteria|Rep: Polysaccharide biosynthesis
protein - Aeromonas hydrophila subsp. hydrophila (strain
ATCC 7966 / NCIB 9240)
Length = 404
Score = 31.1 bits (67), Expect = 6.7
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 252 MSHTKQSVARMLLGGYVHMMGALLPLITVDVL 347
MSH K+ + L G V ++G L+P++T+ +L
Sbjct: 1 MSHKKELIKNFLSFGAVDILGLLIPIVTMPIL 32
>UniRef50_Q84ZG1 Cluster: Putative uncharacterized protein
P0656C04.121; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0656C04.121 - Oryza sativa subsp. japonica (Rice)
Length = 184
Score = 31.1 bits (67), Expect = 6.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -2
Query: 86 CSLREGPWR*LPPDGPADDHGHRSLV 9
C LR P LPP P+ HGHR LV
Sbjct: 69 CRLRARPRPPLPPSPPSPRHGHRCLV 94
>UniRef50_Q4QG46 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1445
Score = 31.1 bits (67), Expect = 6.7
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = -3
Query: 142 VPKEVARDVDLFAANHNN-----FVPFEKDLGDDCRQTAQQMTTAIDHS 11
VP ++ R+ HNN FVPF ++ +D QT QQ+ +A+ H+
Sbjct: 271 VPADMNRNATSNMKGHNNGDPGDFVPFAREEKEDPIQTTQQLYSAVCHA 319
>UniRef50_A4HCF1 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 2421
Score = 31.1 bits (67), Expect = 6.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 45 VWRQSSPRSFSKGTKL--LWFAANKSTSLATSLGTNSSLCHSCV-RGATCNPARGPFHFR 215
++ Q P+ S GT + W ++ + +T+ +N S CHSC+ T +G F
Sbjct: 1971 LYPQMPPQQRSTGTLMGGSWHSSRALSQASTAAPSNGSFCHSCLSENVTPLLPQGSFSVM 2030
Query: 216 AP 221
AP
Sbjct: 2031 AP 2032
>UniRef50_Q5B343 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1146
Score = 31.1 bits (67), Expect = 6.7
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 48 WRQSSPRSFSKG--TKLLWFAANKSTSL-ATSLGTNSSLCHSCVRGATCNPARG 200
W Q RSF++ +L W A + L A +LGT L S G +C+P G
Sbjct: 212 WHQKGRRSFAEDGMAQLFWVRAKEFCFLGAGALGTTEILLRSKKHGLSCSPLVG 265
>UniRef50_Q9FBI4 Cluster: Putative integral membrane protein; n=2;
Streptomyces|Rep: Putative integral membrane protein -
Streptomyces coelicolor
Length = 355
Score = 30.7 bits (66), Expect = 8.8
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 189 PARGPFH-FRAPSKILWKTVRGMSHTKQSVARMLLGGYVHMMGALLPLITV 338
PA G H F A ++ + RG++ SV +LLG + +GAL L+T+
Sbjct: 191 PAAGCAHLFAAGARRKLSSSRGLTDFSASVRPLLLGAFALYLGALAALLTL 241
>UniRef50_Q6MZ46 Cluster: Putative uncharacterized protein MUP065c;
n=1; Mycobacterium ulcerans Agy99|Rep: Putative
uncharacterized protein MUP065c - Mycobacterium ulcerans
(strain Agy99)
Length = 293
Score = 30.7 bits (66), Expect = 8.8
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 120 SLATSLGTNSSLCHSCVRGATCNPARGPFHFRAPSKILWKTVRGMSHTKQSVARMLLGGY 299
+L GT +L + A GP + P+K L + V +H + AR+L+G +
Sbjct: 39 ALELPTGTGKTLPGLLIAEWVRRKAAGPVLYATPTKQLARQVLATAHAEGVPARLLVGSH 98
Query: 300 VH 305
+H
Sbjct: 99 LH 100
>UniRef50_A7I361 Cluster: MloA; n=1; Campylobacter hominis ATCC
BAA-381|Rep: MloA - Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
Length = 359
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 154 KLEFVPKEVARDVDLFAANHNNFVPFEKDLG 62
K EF+PKE+ D++L A N+ + ++LG
Sbjct: 3 KKEFIPKELPLDIELNAENYQLLISASRELG 33
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,204,945
Number of Sequences: 1657284
Number of extensions: 7391978
Number of successful extensions: 20912
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 20390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20876
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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