Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00376
(372 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 1.3
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 20 7.1
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 20 7.1
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 20 7.1
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 20 7.1
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 20 9.4
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 20 9.4
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 20 9.4
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 20 9.4
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 22.6 bits (46), Expect = 1.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 230 SMEDCKRYVPH 262
++EDC YVPH
Sbjct: 325 NIEDCLNYVPH 335
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 20.2 bits (40), Expect = 7.1
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +2
Query: 128 NFFRNKLKLMSFLRKRCNV 184
N+ + ++ +SF K CN+
Sbjct: 5 NYSKKDIRSLSFFYKICNI 23
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 20.2 bits (40), Expect = 7.1
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 26 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLR 169
RG +LG L A++ +++ + IN FF K+ S LR
Sbjct: 329 RGTILGILDAIVTFLIVMIQFEMTQNSTNINFVSTFF--KIPFYSTLR 374
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 20.2 bits (40), Expect = 7.1
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +2
Query: 128 NFFRNKLKLMSFLRKRCNV 184
N+ + ++ +SF K CN+
Sbjct: 5 NYSKKDIRSLSFFYKICNI 23
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 141 TNSSLCHSCVRGATCNPARGPFHFRAPS 224
TNS V+G + P HF PS
Sbjct: 12 TNSEAARDFVQGYPASVQPLPRHFNPPS 39
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 80 LREGPWR*LPPDGPADDH 27
LR+ + PPD P DD+
Sbjct: 82 LRDAVEKRPPPDEPIDDY 99
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 19.8 bits (39), Expect = 9.4
Identities = 7/25 (28%), Positives = 12/25 (48%)
Frame = +3
Query: 42 AVWRQSSPRSFSKGTKLLWFAANKS 116
+ W ++ R K K+ W NK+
Sbjct: 132 STWFANARRRLKKENKMTWEPKNKT 156
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 195 EQDCTLHLLRRNDISLSLFLKKL 127
+++ TLHL+ R + +F+K L
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTL 84
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 195 EQDCTLHLLRRNDISLSLFLKKL 127
+++ TLHL+ R + +F+K L
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTL 160
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 195 EQDCTLHLLRRNDISLSLFLKKL 127
+++ TLHL+ R + +F+K L
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTL 236
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 195 EQDCTLHLLRRNDISLSLFLKKL 127
+++ TLHL+ R + +F+K L
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTL 312
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 195 EQDCTLHLLRRNDISLSLFLKKL 127
+++ TLHL+ R + +F+K L
Sbjct: 366 QKESTLHLVLRLRGGMQIFVKTL 388
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 195 EQDCTLHLLRRNDISLSLFLKKL 127
+++ TLHL+ R + +F+K L
Sbjct: 442 QKESTLHLVLRLRGGMQIFVKTL 464
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 195 EQDCTLHLLRRNDISLSLFLKKL 127
+++ TLHL+ R + +F+K L
Sbjct: 518 QKESTLHLVLRLRGGMQIFVKTL 540
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 195 EQDCTLHLLRRNDISLSLFLKKL 127
+++ TLHL+ R + +F+K L
Sbjct: 594 QKESTLHLVLRLRGGMQIFVKTL 616
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 195 EQDCTLHLLRRNDISLSLFLKKL 127
+++ TLHL+ R + +F+K L
Sbjct: 34 QKESTLHLVLRLRGGMQIFVKTL 56
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,324
Number of Sequences: 336
Number of extensions: 1917
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7722305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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