Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00376
         (372 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   1.2  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   4.9  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            22   8.5  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +3

Query: 138 GTNSSLCHSCVRGATCNPAR-GPF 206
           G     C SC  G   NPAR GPF
Sbjct: 698 GYLGQFCESCAPGYRHNPARGGPF 721


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 287 EHSCHALFCVGHTSY 243
           E  C+  + VGHTSY
Sbjct: 274 EQKCYKCWKVGHTSY 288


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 108 NKSTSLATSLGTNSSLCHSCVRGATCN 188
           N +  + T+     +L + C RG+ CN
Sbjct: 16  NNTECIDTTTYAKKNLNYCCCRGSMCN 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,770
Number of Sequences: 2352
Number of extensions: 8239
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28374390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)