Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00376
(372 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 126 3e-29
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 126 3e-29
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 126 3e-29
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 126 3e-29
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 126 3e-29
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 126 3e-29
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 126 3e-29
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 126 3e-29
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 126 3e-29
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 126 3e-29
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 124 1e-28
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 118 5e-27
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 50 3e-06
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 50 3e-06
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 35 0.073
BC024197-1|AAH24197.1| 803|Homo sapiens zinc finger protein 226... 30 2.1
AK023091-1|BAB14398.1| 803|Homo sapiens protein ( Homo sapiens ... 30 2.1
AF246126-1|AAF76875.1| 686|Homo sapiens zinc finger protein pro... 30 2.1
AF228418-1|AAF34786.1| 803|Homo sapiens zinc finger protein ZNF... 30 2.1
AC074331-3|AAF88103.1| 803|Homo sapiens zinc finger protein 226... 30 2.1
U88965-1|AAC39932.1| 201|Homo sapiens unknown protein. 29 4.8
AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein. 29 6.3
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 113
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 113
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 113
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 113
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 113
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 6 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 65
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 111
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 113
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 113
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 113
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 126 bits (303), Expect = 3e-29
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYD 113
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 124 bits (298), Expect = 1e-28
Identities = 59/106 (55%), Positives = 75/106 (70%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 68 RGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYD 113
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 118 bits (285), Expect = 5e-27
Identities = 58/106 (54%), Positives = 73/106 (68%)
Frame = +2
Query: 14 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVQSC 193
V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N
Sbjct: 8 VLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNTSPS 67
Query: 194 SWTFPF*SSI*DSMEDCKRYVPHKTERGKNALRRLRTYDGCPPPFD 331
+ F + + +PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 68 RGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYD 113
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 49.6 bits (113), Expect = 3e-06
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 186 NPARGPFHFRAPSKILWKTVRGM 254
NP+RGP+HFRAPS+I W+TVRGM
Sbjct: 4 NPSRGPYHFRAPSRIFWRTVRGM 26
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +2
Query: 254 VPHKTERGKNALRRLRTYDGCPPPFD 331
+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 27 LPHKTKRGQAALDRLKVFDGIPPPYD 52
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 49.6 bits (113), Expect = 3e-06
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 186 NPARGPFHFRAPSKILWKTVRGM 254
NP+RGP+HFRAPS+I W+TVRGM
Sbjct: 4 NPSRGPYHFRAPSRIFWRTVRGM 26
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +2
Query: 254 VPHKTERGKNALRRLRTYDGCPPPFD 331
+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 27 LPHKTKRGQAALDRLKVFDGIPPPYD 52
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 35.1 bits (77), Expect = 0.073
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 260 HKTERGKNALRRLRTYDGCPPPFD 331
HKT+RG +L L+ +DG PPP+D
Sbjct: 4 HKTKRGHASLDCLKVFDGIPPPYD 27
>BC024197-1|AAH24197.1| 803|Homo sapiens zinc finger protein 226
protein.
Length = 803
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 295 PPKSILATLCFVWDIPLTVFHRILDGALKWKGPRAGLHVAPLTQE 161
P K + F W LTV HRI G +K R G ++ TQE
Sbjct: 754 PYKCEICGKSFSWRSNLTVHHRIHVGDKSYKSNRGGKNIRESTQE 798
>AK023091-1|BAB14398.1| 803|Homo sapiens protein ( Homo sapiens
cDNA FLJ13029 fis, clone NT2RP3001057, moderately
similar to ZINC FINGER PROTEIN 91. ).
Length = 803
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 295 PPKSILATLCFVWDIPLTVFHRILDGALKWKGPRAGLHVAPLTQE 161
P K + F W LTV HRI G +K R G ++ TQE
Sbjct: 754 PYKCEICGKSFSWRSNLTVHHRIHVGDKSYKSNRGGKNIRESTQE 798
>AF246126-1|AAF76875.1| 686|Homo sapiens zinc finger protein
protein.
Length = 686
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 295 PPKSILATLCFVWDIPLTVFHRILDGALKWKGPRAGLHVAPLTQE 161
P K + F W LTV HRI G +K R G ++ TQE
Sbjct: 637 PYKCEICGKSFSWRSNLTVHHRIHVGDKSYKSNRGGKNIRESTQE 681
>AF228418-1|AAF34786.1| 803|Homo sapiens zinc finger protein ZNF226
protein.
Length = 803
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 295 PPKSILATLCFVWDIPLTVFHRILDGALKWKGPRAGLHVAPLTQE 161
P K + F W LTV HRI G +K R G ++ TQE
Sbjct: 754 PYKCEICGKSFSWRSNLTVHHRIHVGDKSYKSNRGGKNIRESTQE 798
>AC074331-3|AAF88103.1| 803|Homo sapiens zinc finger protein 226
protein.
Length = 803
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 295 PPKSILATLCFVWDIPLTVFHRILDGALKWKGPRAGLHVAPLTQE 161
P K + F W LTV HRI G +K R G ++ TQE
Sbjct: 754 PYKCEICGKSFSWRSNLTVHHRIHVGDKSYKSNRGGKNIRESTQE 798
>U88965-1|AAC39932.1| 201|Homo sapiens unknown protein.
Length = 201
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 249 LLQSSIES*MEL*NGKVHEQDCTLHLLRRNDISLSLFL 136
+LQSS ++ G +HEQ C +HL+ N + S+ L
Sbjct: 111 VLQSSDYVALQQGEGDIHEQVCKMHLMPANGVQPSIAL 148
>AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein.
Length = 769
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 42 AVWRQSSPRSFSKGTKLLWFAANKSTSLATSLGTNSSLCHSC 167
+ WRQS PR + +G + L A ++ T+L + T+ + C
Sbjct: 30 SAWRQSRPREYYEGGRGL-HAPDRETALGLGIATSERMLGIC 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,270,812
Number of Sequences: 237096
Number of extensions: 1197458
Number of successful extensions: 2933
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2909
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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